Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 AC034268.1-201ENST00000441047 882 ntBASIC19.19■□□□□ 0.66
RTTNQ86VV8 DUX4L4-201ENST00000566884 1269 ntBASIC19.19■□□□□ 0.66
RTTNQ86VV8 MIR3181-201ENST00000578512 73 ntBASIC19.19■□□□□ 0.66
RTTNQ86VV8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTTNQ86VV8 AC010525.1-201ENST00000585559 441 ntBASIC19.19■□□□□ 0.66
RTTNQ86VV8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.19■□□□□ 0.66
RTTNQ86VV8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTTNQ86VV8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTTNQ86VV8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RTTNQ86VV8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTTNQ86VV8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTTNQ86VV8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTTNQ86VV8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.18■□□□□ 0.66
RTTNQ86VV8 AC133637.1-201ENST00000624115 1537 ntBASIC19.18■□□□□ 0.66
RTTNQ86VV8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RTTNQ86VV8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.18■□□□□ 0.66
RTTNQ86VV8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RTTNQ86VV8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RTTNQ86VV8 AL138724.1-201ENST00000606771 1088 ntBASIC19.17■□□□□ 0.66
RTTNQ86VV8 AC011298.3-201ENST00000615796 283 ntBASIC19.17■□□□□ 0.66
RTTNQ86VV8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.17■□□□□ 0.66
RTTNQ86VV8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTTNQ86VV8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 AP001330.3-201ENST00000520123 633 ntBASIC19.16■□□□□ 0.66
RTTNQ86VV8 AL499627.2-201ENST00000606283 725 ntBASIC19.16■□□□□ 0.66
RTTNQ86VV8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RTTNQ86VV8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RTTNQ86VV8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.16■□□□□ 0.66
RTTNQ86VV8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RTTNQ86VV8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RTTNQ86VV8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 SLC47A1P1-202ENST00000449666 945 ntBASIC19.15■□□□□ 0.66
RTTNQ86VV8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.15■□□□□ 0.66
RTTNQ86VV8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.15■□□□□ 0.66
RTTNQ86VV8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTTNQ86VV8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTTNQ86VV8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.14■□□□□ 0.66
RTTNQ86VV8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTTNQ86VV8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTTNQ86VV8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTTNQ86VV8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTTNQ86VV8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTTNQ86VV8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTTNQ86VV8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 AL136162.1-201ENST00000607711 1078 ntBASIC19.14■□□□□ 0.65
RTTNQ86VV8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.14■□□□□ 0.65
RTTNQ86VV8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTTNQ86VV8 pRNA.6-201ENST00000610482 90 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms