Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.26■□□□□ 0.19
CMC4P56277 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.26■□□□□ 0.19
CMC4P56277 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CMC4P56277 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CMC4P56277 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.25■□□□□ 0.19
CMC4P56277 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CMC4P56277 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CMC4P56277 IRS3P-201ENST00000223076 1006 ntBASIC16.25■□□□□ 0.19
CMC4P56277 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.25■□□□□ 0.19
CMC4P56277 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.25■□□□□ 0.19
CMC4P56277 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CMC4P56277 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CMC4P56277 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CMC4P56277 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CMC4P56277 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.25■□□□□ 0.19
CMC4P56277 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CMC4P56277 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.24■□□□□ 0.19
CMC4P56277 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CMC4P56277 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CMC4P56277 TSPY26P-201ENST00000476365 1326 ntBASIC16.24■□□□□ 0.19
CMC4P56277 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CMC4P56277 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CMC4P56277 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.24■□□□□ 0.19
CMC4P56277 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.24■□□□□ 0.19
CMC4P56277 AC079089.2-201ENST00000531211 1277 ntBASIC16.24■□□□□ 0.19
CMC4P56277 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.24■□□□□ 0.19
CMC4P56277 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CMC4P56277 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CMC4P56277 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CMC4P56277 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.24■□□□□ 0.19
CMC4P56277 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.23■□□□□ 0.19
CMC4P56277 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CMC4P56277 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMC4P56277 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CMC4P56277 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.23■□□□□ 0.19
CMC4P56277 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.23■□□□□ 0.19
CMC4P56277 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CMC4P56277 MIR572-201ENST00000384983 95 ntBASIC16.23■□□□□ 0.19
CMC4P56277 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.23■□□□□ 0.19
CMC4P56277 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CMC4P56277 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CMC4P56277 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CMC4P56277 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CMC4P56277 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CMC4P56277 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CMC4P56277 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.22■□□□□ 0.19
CMC4P56277 AC019069.1-201ENST00000610008 1333 ntBASIC16.22■□□□□ 0.19
CMC4P56277 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CMC4P56277 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.22■□□□□ 0.19
CMC4P56277 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CMC4P56277 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.22■□□□□ 0.19
CMC4P56277 AL358852.1-201ENST00000623174 1268 ntBASIC16.22■□□□□ 0.19
CMC4P56277 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.22■□□□□ 0.19
CMC4P56277 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CMC4P56277 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CMC4P56277 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CMC4P56277 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CMC4P56277 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CMC4P56277 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CMC4P56277 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CMC4P56277 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.21■□□□□ 0.19
CMC4P56277 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CMC4P56277 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.21■□□□□ 0.19
CMC4P56277 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.21■□□□□ 0.19
CMC4P56277 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.21■□□□□ 0.19
CMC4P56277 AC105265.2-201ENST00000467189 838 ntBASIC16.21■□□□□ 0.19
CMC4P56277 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.21■□□□□ 0.19
CMC4P56277 AL034346.1-201ENST00000568244 1277 ntBASIC16.21■□□□□ 0.19
CMC4P56277 AL354811.1-201ENST00000610286 706 ntBASIC16.21■□□□□ 0.19
CMC4P56277 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.21■□□□□ 0.19
CMC4P56277 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.21■□□□□ 0.19
CMC4P56277 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CMC4P56277 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CMC4P56277 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CMC4P56277 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.21■□□□□ 0.18
CMC4P56277 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.21■□□□□ 0.18
CMC4P56277 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CMC4P56277 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CMC4P56277 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CMC4P56277 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CMC4P56277 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.2■□□□□ 0.18
CMC4P56277 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.2■□□□□ 0.18
CMC4P56277 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CMC4P56277 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CMC4P56277 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms