Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNFP41002 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNFP41002 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.92■■□□□ 1.1
CCNFP41002 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.92■■□□□ 1.1
CCNFP41002 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNFP41002 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.92■■□□□ 1.1
CCNFP41002 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNFP41002 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 AC010542.4-201ENST00000563151 1910 ntBASIC21.92■■□□□ 1.1
CCNFP41002 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.92■■□□□ 1.1
CCNFP41002 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCNFP41002 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CCNFP41002 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCNFP41002 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCNFP41002 FP325331.1-202ENST00000623531 1380 ntBASIC21.9■■□□□ 1.1
CCNFP41002 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNFP41002 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNFP41002 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNFP41002 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.9■■□□□ 1.1
CCNFP41002 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNFP41002 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.9■■□□□ 1.1
CCNFP41002 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CCNFP41002 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNFP41002 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNFP41002 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.9■■□□□ 1.1
CCNFP41002 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCNFP41002 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCNFP41002 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.1
CCNFP41002 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCNFP41002 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.89■■□□□ 1.1
CCNFP41002 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCNFP41002 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.89■■□□□ 1.1
CCNFP41002 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNFP41002 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CCNFP41002 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCNFP41002 LINC01960-201ENST00000563759 1884 ntBASIC21.89■■□□□ 1.09
CCNFP41002 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CCNFP41002 AC026310.3-201ENST00000625186 2373 ntBASIC21.89■■□□□ 1.09
CCNFP41002 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNFP41002 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNFP41002 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNFP41002 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNFP41002 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.89■■□□□ 1.09
CCNFP41002 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCNFP41002 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNFP41002 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNFP41002 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCNFP41002 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNFP41002 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNFP41002 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCNFP41002 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNFP41002 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNFP41002 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.88■■□□□ 1.09
CCNFP41002 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNFP41002 FAM99A-202ENST00000538190 1989 ntBASIC21.88■■□□□ 1.09
CCNFP41002 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCNFP41002 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.88■■□□□ 1.09
CCNFP41002 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.87■■□□□ 1.09
CCNFP41002 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.87■■□□□ 1.09
CCNFP41002 C17orf82-201ENST00000623772 1530 ntBASIC21.87■■□□□ 1.09
CCNFP41002 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.87■■□□□ 1.09
CCNFP41002 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNFP41002 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.87■■□□□ 1.09
CCNFP41002 AC131212.1-201ENST00000613771 668 ntBASIC21.87■■□□□ 1.09
CCNFP41002 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNFP41002 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCNFP41002 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCNFP41002 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CCNFP41002 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCNFP41002 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCNFP41002 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CCNFP41002 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.86■■□□□ 1.09
CCNFP41002 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.86■■□□□ 1.09
CCNFP41002 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNFP41002 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNFP41002 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNFP41002 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCNFP41002 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.86■■□□□ 1.09
CCNFP41002 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.86■■□□□ 1.09
CCNFP41002 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCNFP41002 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.86■■□□□ 1.09
CCNFP41002 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNFP41002 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNFP41002 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCNFP41002 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCNFP41002 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms