Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y1P22090 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y1P22090 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y1P22090 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPS4Y1P22090 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y1P22090 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.08■□□□□ 0.81
RPS4Y1P22090 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y1P22090 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y1P22090 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
RPS4Y1P22090 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RPS4Y1P22090 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y1P22090 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RPS4Y1P22090 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.08■□□□□ 0.8
RPS4Y1P22090 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y1P22090 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y1P22090 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y1P22090 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RPS4Y1P22090 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RPS4Y1P22090 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RPS4Y1P22090 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.07■□□□□ 0.8
RPS4Y1P22090 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RPS4Y1P22090 AL138724.1-201ENST00000606771 1088 ntBASIC20.07■□□□□ 0.8
RPS4Y1P22090 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.07■□□□□ 0.8
RPS4Y1P22090 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y1P22090 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y1P22090 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y1P22090 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y1P22090 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y1P22090 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y1P22090 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y1P22090 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.06■□□□□ 0.8
RPS4Y1P22090 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y1P22090 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RPS4Y1P22090 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y1P22090 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS4Y1P22090 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RPS4Y1P22090 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y1P22090 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y1P22090 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y1P22090 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y1P22090 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.05■□□□□ 0.8
RPS4Y1P22090 SERBP1P1-201ENST00000396021 1160 ntBASIC20.05■□□□□ 0.8
RPS4Y1P22090 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RPS4Y1P22090 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS4Y1P22090 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y1P22090 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RPS4Y1P22090 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y1P22090 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
RPS4Y1P22090 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y1P22090 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.04■□□□□ 0.8
RPS4Y1P22090 DUX4L19-201ENST00000557448 1267 ntBASIC20.04■□□□□ 0.8
RPS4Y1P22090 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y1P22090 AC068587.7-201ENST00000641602 218 ntBASIC20.04■□□□□ 0.8
RPS4Y1P22090 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
RPS4Y1P22090 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
RPS4Y1P22090 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y1P22090 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y1P22090 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y1P22090 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y1P22090 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RPS4Y1P22090 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y1P22090 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.03■□□□□ 0.8
RPS4Y1P22090 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y1P22090 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
RPS4Y1P22090 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.03■□□□□ 0.8
RPS4Y1P22090 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.03■□□□□ 0.8
RPS4Y1P22090 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.03■□□□□ 0.8
RPS4Y1P22090 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y1P22090 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y1P22090 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y1P22090 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y1P22090 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.02■□□□□ 0.8
RPS4Y1P22090 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4Y1P22090 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4Y1P22090 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.02■□□□□ 0.8
RPS4Y1P22090 AC079089.2-201ENST00000531211 1277 ntBASIC20.02■□□□□ 0.8
RPS4Y1P22090 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.02■□□□□ 0.8
RPS4Y1P22090 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.02■□□□□ 0.8
RPS4Y1P22090 SYT6-210ENST00000641643 1587 ntBASIC20.02■□□□□ 0.8
RPS4Y1P22090 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPS4Y1P22090 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RPS4Y1P22090 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.02■□□□□ 0.79
RPS4Y1P22090 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms