Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.91■■□□□ 1.58
SPDYE3A6NKU9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
SPDYE3A6NKU9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPDYE3A6NKU9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SPDYE3A6NKU9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.9■■□□□ 1.58
SPDYE3A6NKU9 MIR6084-201ENST00000622012 110 ntBASIC24.9■■□□□ 1.58
SPDYE3A6NKU9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPDYE3A6NKU9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPDYE3A6NKU9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPDYE3A6NKU9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.57
SPDYE3A6NKU9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SPDYE3A6NKU9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SPDYE3A6NKU9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.57
SPDYE3A6NKU9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 AC027612.3-201ENST00000413684 1047 ntBASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 AC097381.1-201ENST00000429019 1296 ntBASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 MIR6821-201ENST00000617625 74 ntBASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
SPDYE3A6NKU9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SPDYE3A6NKU9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 YBX1P1-201ENST00000445822 960 ntBASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPDYE3A6NKU9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.85■■□□□ 1.57
SPDYE3A6NKU9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
SPDYE3A6NKU9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SPDYE3A6NKU9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPDYE3A6NKU9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.85■■□□□ 1.57
SPDYE3A6NKU9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SPDYE3A6NKU9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPDYE3A6NKU9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.84■■□□□ 1.57
SPDYE3A6NKU9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SPDYE3A6NKU9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.84■■□□□ 1.57
SPDYE3A6NKU9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPDYE3A6NKU9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SPDYE3A6NKU9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.84■■□□□ 1.57
SPDYE3A6NKU9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 SMUG1P1-201ENST00000590640 811 ntBASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 MIR5787-201ENST00000611784 55 ntBASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SPDYE3A6NKU9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SPDYE3A6NKU9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.83■■□□□ 1.56
SPDYE3A6NKU9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms