Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PNPLA3Q9NST1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.89■□□□□ 0.94
PNPLA3Q9NST1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PNPLA3Q9NST1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 AC092053.2-201ENST00000640557 1818 ntBASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PNPLA3Q9NST1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 FBXW4P1-201ENST00000426721 2239 ntBASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 MIR4466-201ENST00000606121 54 ntBASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PNPLA3Q9NST1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PNPLA3Q9NST1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 AL139246.5-201ENST00000606645 996 ntBASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 AC073130.3-201ENST00000624389 2278 ntBASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.86■□□□□ 0.93
PNPLA3Q9NST1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 MIR638-201ENST00000385237 100 ntBASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 AC139530.1-201ENST00000575312 1977 ntBASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PNPLA3Q9NST1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 AL512631.2-201ENST00000604634 923 ntBASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PNPLA3Q9NST1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 MIR6722-201ENST00000617286 78 ntBASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.83■□□□□ 0.93
PNPLA3Q9NST1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.83■□□□□ 0.92
PNPLA3Q9NST1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.82■□□□□ 0.92
PNPLA3Q9NST1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms