Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMOQ99835 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMOQ99835 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SMOQ99835 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMOQ99835 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMOQ99835 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMOQ99835 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.08■■□□□ 1.29
SMOQ99835 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.08■■□□□ 1.29
SMOQ99835 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMOQ99835 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.08■■□□□ 1.29
SMOQ99835 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMOQ99835 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMOQ99835 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMOQ99835 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SMOQ99835 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.07■■□□□ 1.28
SMOQ99835 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.07■■□□□ 1.28
SMOQ99835 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.07■■□□□ 1.28
SMOQ99835 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.07■■□□□ 1.28
SMOQ99835 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.07■■□□□ 1.28
SMOQ99835 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.07■■□□□ 1.28
SMOQ99835 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMOQ99835 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMOQ99835 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMOQ99835 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SMOQ99835 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMOQ99835 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.06■■□□□ 1.28
SMOQ99835 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.06■■□□□ 1.28
SMOQ99835 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.06■■□□□ 1.28
SMOQ99835 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMOQ99835 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMOQ99835 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMOQ99835 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.06■■□□□ 1.28
SMOQ99835 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMOQ99835 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.06■■□□□ 1.28
SMOQ99835 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.06■■□□□ 1.28
SMOQ99835 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.06■■□□□ 1.28
SMOQ99835 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMOQ99835 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SMOQ99835 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.05■■□□□ 1.28
SMOQ99835 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 AC026271.2-201ENST00000428091 497 ntBASIC23.05■■□□□ 1.28
SMOQ99835 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.05■■□□□ 1.28
SMOQ99835 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.05■■□□□ 1.28
SMOQ99835 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.05■■□□□ 1.28
SMOQ99835 AC087239.1-201ENST00000622671 572 ntBASIC23.05■■□□□ 1.28
SMOQ99835 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SMOQ99835 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.05■■□□□ 1.28
SMOQ99835 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMOQ99835 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMOQ99835 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMOQ99835 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.04■■□□□ 1.28
SMOQ99835 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.04■■□□□ 1.28
SMOQ99835 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.04■■□□□ 1.28
SMOQ99835 AC012414.1-201ENST00000556676 535 ntBASIC23.04■■□□□ 1.28
SMOQ99835 RARRES2P6-201ENST00000567333 442 ntBASIC23.04■■□□□ 1.28
SMOQ99835 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMOQ99835 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.04■■□□□ 1.28
SMOQ99835 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
SMOQ99835 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMOQ99835 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMOQ99835 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SMOQ99835 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMOQ99835 MIR6084-201ENST00000622012 110 ntBASIC23.03■■□□□ 1.28
SMOQ99835 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SMOQ99835 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMOQ99835 OXCT2P1-201ENST00000447263 1535 ntBASIC23.03■■□□□ 1.28
SMOQ99835 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
SMOQ99835 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMOQ99835 AC087742.1-201ENST00000575880 1738 ntBASIC23.02■■□□□ 1.28
SMOQ99835 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.02■■□□□ 1.28
SMOQ99835 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.02■■□□□ 1.28
SMOQ99835 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMOQ99835 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMOQ99835 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.02■■□□□ 1.28
SMOQ99835 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMOQ99835 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.02■■□□□ 1.28
SMOQ99835 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.02■■□□□ 1.28
SMOQ99835 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SMOQ99835 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.02■■□□□ 1.28
SMOQ99835 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMOQ99835 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.02■■□□□ 1.28
SMOQ99835 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.02■■□□□ 1.28
SMOQ99835 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.02■■□□□ 1.28
SMOQ99835 AL358852.1-201ENST00000623174 1268 ntBASIC23.02■■□□□ 1.28
SMOQ99835 AC105233.4-201ENST00000642045 216 ntBASIC23.02■■□□□ 1.28
SMOQ99835 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMOQ99835 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SMOQ99835 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SMOQ99835 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMOQ99835 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMOQ99835 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.01■■□□□ 1.27
SMOQ99835 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMOQ99835 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.01■■□□□ 1.27
SMOQ99835 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms