Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43Q96BQ3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43Q96BQ3 AC104187.1-201ENST00000607510 612 ntBASIC24.14■■□□□ 1.45
TRIM43Q96BQ3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43Q96BQ3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TRIM43Q96BQ3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRIM43Q96BQ3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 AC010141.3-201ENST00000456659 717 ntBASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 AC068587.7-201ENST00000641602 218 ntBASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 AC145676.1-201ENST00000514988 2004 ntBASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.13■■□□□ 1.45
TRIM43Q96BQ3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM43Q96BQ3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 AC004687.1-201ENST00000579003 1625 ntBASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 UBE2DNL-204ENST00000602536 740 ntBASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
TRIM43Q96BQ3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 AC098934.4-201ENST00000564127 592 ntBASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 AC133041.1-202ENST00000642053 222 ntBASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM43Q96BQ3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.09■■□□□ 1.45
TRIM43Q96BQ3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
TRIM43Q96BQ3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.09■■□□□ 1.45
TRIM43Q96BQ3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.09■■□□□ 1.45
TRIM43Q96BQ3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM43Q96BQ3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TRIM43Q96BQ3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.09■■□□□ 1.45
TRIM43Q96BQ3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
TRIM43Q96BQ3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43Q96BQ3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43Q96BQ3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43Q96BQ3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM43Q96BQ3 AC073210.2-201ENST00000430369 194 ntBASIC24.08■■□□□ 1.45
TRIM43Q96BQ3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TRIM43Q96BQ3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TRIM43Q96BQ3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TRIM43Q96BQ3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 AC087239.1-201ENST00000622671 572 ntBASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TRIM43Q96BQ3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.06■■□□□ 1.44
TRIM43Q96BQ3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.06■■□□□ 1.44
TRIM43Q96BQ3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM43Q96BQ3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TRIM43Q96BQ3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
TRIM43Q96BQ3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM43Q96BQ3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM43Q96BQ3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM43Q96BQ3 POU5F1P3-201ENST00000428824 1078 ntBASIC24.05■■□□□ 1.44
TRIM43Q96BQ3 AF201337.1-201ENST00000520239 748 ntBASIC24.05■■□□□ 1.44
TRIM43Q96BQ3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM43Q96BQ3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TRIM43Q96BQ3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM43Q96BQ3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms