Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.52■■■□□ 2
SH3TC1Q8TE82 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SH3TC1Q8TE82 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
SH3TC1Q8TE82 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
SH3TC1Q8TE82 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 SMUG1P1-201ENST00000590640 811 ntBASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SH3TC1Q8TE82 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SH3TC1Q8TE82 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
SH3TC1Q8TE82 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
SH3TC1Q8TE82 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SH3TC1Q8TE82 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SH3TC1Q8TE82 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.49■■□□□ 1.99
SH3TC1Q8TE82 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SH3TC1Q8TE82 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SH3TC1Q8TE82 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
SH3TC1Q8TE82 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.47■■□□□ 1.99
SH3TC1Q8TE82 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.47■■□□□ 1.99
SH3TC1Q8TE82 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SH3TC1Q8TE82 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
SH3TC1Q8TE82 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SH3TC1Q8TE82 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SH3TC1Q8TE82 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SH3TC1Q8TE82 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
SH3TC1Q8TE82 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.45■■□□□ 1.98
SH3TC1Q8TE82 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 AC006015.1-201ENST00000429970 570 ntBASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 OXCT2P1-201ENST00000447263 1535 ntBASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 AP004607.4-201ENST00000530158 1459 ntBASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.44■■□□□ 1.98
SH3TC1Q8TE82 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.43■■□□□ 1.98
SH3TC1Q8TE82 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
SH3TC1Q8TE82 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
SH3TC1Q8TE82 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SH3TC1Q8TE82 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SH3TC1Q8TE82 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.42■■□□□ 1.98
SH3TC1Q8TE82 AC004854.2-201ENST00000608450 1441 ntBASIC27.42■■□□□ 1.98
SH3TC1Q8TE82 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SH3TC1Q8TE82 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SH3TC1Q8TE82 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SH3TC1Q8TE82 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
SH3TC1Q8TE82 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms