Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 IGHV3-19-201ENST00000521488 291 ntBASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FNDC9Q8TBE3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.67■□□□□ 0.74
FNDC9Q8TBE3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FNDC9Q8TBE3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.66■□□□□ 0.74
FNDC9Q8TBE3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.66■□□□□ 0.74
FNDC9Q8TBE3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC9Q8TBE3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC9Q8TBE3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FNDC9Q8TBE3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FNDC9Q8TBE3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 AP005435.1-201ENST00000529293 1178 ntBASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.65■□□□□ 0.74
FNDC9Q8TBE3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNDC9Q8TBE3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.64■□□□□ 0.74
FNDC9Q8TBE3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FNDC9Q8TBE3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FNDC9Q8TBE3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 RARRES2P6-201ENST00000567333 442 ntBASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FNDC9Q8TBE3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 AC079834.2-201ENST00000609776 1949 ntBASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
FNDC9Q8TBE3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FNDC9Q8TBE3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms