Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.88■■□□□ 1.09
HMGCLP35914 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
HMGCLP35914 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCLP35914 AP001330.3-201ENST00000520123 633 ntBASIC21.88■■□□□ 1.09
HMGCLP35914 AP005435.1-201ENST00000529293 1178 ntBASIC21.88■■□□□ 1.09
HMGCLP35914 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.88■■□□□ 1.09
HMGCLP35914 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HMGCLP35914 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HMGCLP35914 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLP35914 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLP35914 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
HMGCLP35914 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLP35914 MIR939-201ENST00000401314 82 ntBASIC21.87■■□□□ 1.09
HMGCLP35914 SUDS3P1-201ENST00000505831 966 ntBASIC21.87■■□□□ 1.09
HMGCLP35914 AC027682.1-201ENST00000562846 899 ntBASIC21.87■■□□□ 1.09
HMGCLP35914 CA15P2-201ENST00000611168 834 ntBASIC21.87■■□□□ 1.09
HMGCLP35914 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HMGCLP35914 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLP35914 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLP35914 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLP35914 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HMGCLP35914 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HMGCLP35914 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
HMGCLP35914 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
HMGCLP35914 MIR638-201ENST00000385237 100 ntBASIC21.86■■□□□ 1.09
HMGCLP35914 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.86■■□□□ 1.09
HMGCLP35914 AC008764.7-201ENST00000593779 1081 ntBASIC21.86■■□□□ 1.09
HMGCLP35914 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLP35914 AC127496.7-201ENST00000625110 1798 ntBASIC21.86■■□□□ 1.09
HMGCLP35914 AC233723.2-201ENST00000623798 2106 ntBASIC21.86■■□□□ 1.09
HMGCLP35914 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HMGCLP35914 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLP35914 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLP35914 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
HMGCLP35914 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLP35914 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLP35914 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLP35914 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.85■■□□□ 1.09
HMGCLP35914 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
HMGCLP35914 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.85■■□□□ 1.09
HMGCLP35914 AC005837.3-201ENST00000612163 286 ntBASIC21.85■■□□□ 1.09
HMGCLP35914 AL136967.2-201ENST00000623968 743 ntBASIC21.85■■□□□ 1.09
HMGCLP35914 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.85■■□□□ 1.09
HMGCLP35914 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HMGCLP35914 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HMGCLP35914 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HMGCLP35914 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLP35914 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
HMGCLP35914 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.84■■□□□ 1.09
HMGCLP35914 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
HMGCLP35914 AC099791.1-201ENST00000416440 715 ntBASIC21.84■■□□□ 1.09
HMGCLP35914 AF213884.3-201ENST00000563833 479 ntBASIC21.84■■□□□ 1.09
HMGCLP35914 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.84■■□□□ 1.09
HMGCLP35914 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLP35914 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLP35914 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HMGCLP35914 RASA4CP-201ENST00000424092 1398 ntBASIC21.84■■□□□ 1.09
HMGCLP35914 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLP35914 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLP35914 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLP35914 AC091305.1-201ENST00000479476 895 ntBASIC21.83■■□□□ 1.09
HMGCLP35914 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLP35914 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.83■■□□□ 1.09
HMGCLP35914 AC087239.1-201ENST00000622671 572 ntBASIC21.83■■□□□ 1.09
HMGCLP35914 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
HMGCLP35914 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HMGCLP35914 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HMGCLP35914 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HMGCLP35914 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGCLP35914 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGCLP35914 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 AC137767.1-201ENST00000602918 1920 ntBASIC21.82■■□□□ 1.08
HMGCLP35914 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
HMGCLP35914 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGCLP35914 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HMGCLP35914 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
HMGCLP35914 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLP35914 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLP35914 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLP35914 AC010141.3-201ENST00000456659 717 ntBASIC21.81■■□□□ 1.08
HMGCLP35914 AC126544.1-201ENST00000580842 1059 ntBASIC21.81■■□□□ 1.08
HMGCLP35914 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLP35914 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGCLP35914 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.81■■□□□ 1.08
HMGCLP35914 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms