Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 AC103724.3-201ENST00000564481 992 ntBASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-5A0A0J9YX44 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-5A0A0J9YX44 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV5-5A0A0J9YX44 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-5A0A0J9YX44 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-5A0A0J9YX44 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-5A0A0J9YX44 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-5A0A0J9YX44 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.02■□□□□ 0.63
TRBV5-5A0A0J9YX44 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-5A0A0J9YX44 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC004687.1-201ENST00000579003 1625 ntBASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-5A0A0J9YX44 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV5-5A0A0J9YX44 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.99■□□□□ 0.63
TRBV5-5A0A0J9YX44 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 AC005229.4-201ENST00000610085 2198 ntBASIC18.98■□□□□ 0.63
TRBV5-5A0A0J9YX44 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms