Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-3A0A0A0MS03 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 C17orf82-201ENST00000623772 1530 ntBASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-3A0A0A0MS03 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-3A0A0A0MS03 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV5-3A0A0A0MS03 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV5-3A0A0A0MS03 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRBV5-3A0A0A0MS03 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
TRBV5-3A0A0A0MS03 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
TRBV5-3A0A0A0MS03 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 AL024507.2-201ENST00000606070 2574 ntBASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
TRBV5-3A0A0A0MS03 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 AL499627.2-201ENST00000606283 725 ntBASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 AC244015.2-201ENST00000616358 1861 ntBASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRBV5-3A0A0A0MS03 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 Z92544.1-202ENST00000571933 1220 ntBASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.55■□□□□ 0.88
TRBV5-3A0A0A0MS03 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-3A0A0A0MS03 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV5-3A0A0A0MS03 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms