Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 AP004607.4-201ENST00000530158 1459 ntBASIC17.25■□□□□ 0.35
LINC01006Q8NI28 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 LINC01124-201ENST00000409786 2117 ntBASIC17.25■□□□□ 0.35
LINC01006Q8NI28 HLA-L-209ENST00000420110 1011 ntBASIC17.25■□□□□ 0.35
LINC01006Q8NI28 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 AC010141.3-201ENST00000456659 717 ntBASIC17.25■□□□□ 0.35
LINC01006Q8NI28 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 AL353803.4-201ENST00000565882 1934 ntBASIC17.25■□□□□ 0.35
LINC01006Q8NI28 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LINC01006Q8NI28 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 AC004854.2-201ENST00000608450 1441 ntBASIC17.24■□□□□ 0.35
LINC01006Q8NI28 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.24■□□□□ 0.35
LINC01006Q8NI28 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LINC01006Q8NI28 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 SMUG1P1-201ENST00000590640 811 ntBASIC17.23■□□□□ 0.35
LINC01006Q8NI28 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01006Q8NI28 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 AC004812.2-201ENST00000611079 2094 ntBASIC17.22■□□□□ 0.35
LINC01006Q8NI28 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 CDCA4P2-201ENST00000441182 718 ntBASIC17.22■□□□□ 0.35
LINC01006Q8NI28 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 AC073111.5-205ENST00000641717 521 ntBASIC17.22■□□□□ 0.35
LINC01006Q8NI28 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01006Q8NI28 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 KRT19P1-201ENST00000405746 1186 ntBASIC17.21■□□□□ 0.35
LINC01006Q8NI28 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 RAP2CP1-201ENST00000605103 478 ntBASIC17.21■□□□□ 0.35
LINC01006Q8NI28 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01006Q8NI28 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.21■□□□□ 0.34
LINC01006Q8NI28 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC01006Q8NI28 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LINC01006Q8NI28 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms