Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC31.31■■■□□ 2.6
LTBP4Q8N2S1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 AC211429.1-201ENST00000415277 523 ntBASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
LTBP4Q8N2S1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
LTBP4Q8N2S1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.29■■■□□ 2.6
LTBP4Q8N2S1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
LTBP4Q8N2S1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.29■■■□□ 2.6
LTBP4Q8N2S1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 KRT87P-202ENST00000534226 1464 ntBASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
LTBP4Q8N2S1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 CYP2T1P-201ENST00000432607 1285 ntBASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 MIR4497-201ENST00000583208 89 ntBASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 LINC01023-201ENST00000606054 436 ntBASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.27■■■□□ 2.6
LTBP4Q8N2S1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
LTBP4Q8N2S1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.26■■■□□ 2.6
LTBP4Q8N2S1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.26■■■□□ 2.6
LTBP4Q8N2S1 ERN1-208ENST00000606895 2068 ntBASIC31.26■■■□□ 2.59
LTBP4Q8N2S1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.26■■■□□ 2.59
LTBP4Q8N2S1 MKRN4P-201ENST00000444706 1521 ntBASIC31.26■■■□□ 2.59
LTBP4Q8N2S1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
LTBP4Q8N2S1 MME-217ENST00000616757 1315 ntTSL 5 BASIC31.26■■■□□ 2.59
LTBP4Q8N2S1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
LTBP4Q8N2S1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
LTBP4Q8N2S1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
LTBP4Q8N2S1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LTBP4Q8N2S1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LTBP4Q8N2S1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 KRT18P21-201ENST00000515767 1272 ntBASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.23■■■□□ 2.59
LTBP4Q8N2S1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.22■■■□□ 2.59
LTBP4Q8N2S1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LTBP4Q8N2S1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC31.21■■■□□ 2.59
LTBP4Q8N2S1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
LTBP4Q8N2S1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC31.21■■■□□ 2.59
LTBP4Q8N2S1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
LTBP4Q8N2S1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.2■■■□□ 2.58
LTBP4Q8N2S1 ABCB10P1-201ENST00000614297 2181 ntBASIC31.2■■■□□ 2.58
LTBP4Q8N2S1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LTBP4Q8N2S1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
LTBP4Q8N2S1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
LTBP4Q8N2S1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms