Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRMT12Q53H54 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.55■□□□□ 0.88
TRMT12Q53H54 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.54■□□□□ 0.88
TRMT12Q53H54 LINC01960-201ENST00000563759 1884 ntBASIC20.54■□□□□ 0.88
TRMT12Q53H54 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRMT12Q53H54 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRMT12Q53H54 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
TRMT12Q53H54 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.53■□□□□ 0.88
TRMT12Q53H54 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.53■□□□□ 0.88
TRMT12Q53H54 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRMT12Q53H54 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRMT12Q53H54 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRMT12Q53H54 ESRRAP2-201ENST00000418437 1549 ntBASIC20.53■□□□□ 0.88
TRMT12Q53H54 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRMT12Q53H54 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TRMT12Q53H54 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.52■□□□□ 0.88
TRMT12Q53H54 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT12Q53H54 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.52■□□□□ 0.88
TRMT12Q53H54 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT12Q53H54 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.52■□□□□ 0.88
TRMT12Q53H54 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRMT12Q53H54 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.52■□□□□ 0.88
TRMT12Q53H54 AC011298.3-201ENST00000615796 283 ntBASIC20.52■□□□□ 0.88
TRMT12Q53H54 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRMT12Q53H54 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.52■□□□□ 0.87
TRMT12Q53H54 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.52■□□□□ 0.87
TRMT12Q53H54 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.52■□□□□ 0.87
TRMT12Q53H54 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRMT12Q53H54 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRMT12Q53H54 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 AC096631.2-201ENST00000436136 790 ntBASIC20.51■□□□□ 0.87
TRMT12Q53H54 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRMT12Q53H54 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TRMT12Q53H54 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.5■□□□□ 0.87
TRMT12Q53H54 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRMT12Q53H54 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.5■□□□□ 0.87
TRMT12Q53H54 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRMT12Q53H54 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 AL136162.1-201ENST00000607711 1078 ntBASIC20.5■□□□□ 0.87
TRMT12Q53H54 AC136469.2-201ENST00000623944 1028 ntBASIC20.5■□□□□ 0.87
TRMT12Q53H54 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.5■□□□□ 0.87
TRMT12Q53H54 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRMT12Q53H54 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRMT12Q53H54 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRMT12Q53H54 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRMT12Q53H54 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.49■□□□□ 0.87
TRMT12Q53H54 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRMT12Q53H54 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRMT12Q53H54 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRMT12Q53H54 AC024257.2-201ENST00000549699 147 ntBASIC20.49■□□□□ 0.87
TRMT12Q53H54 AC010525.1-201ENST00000585559 441 ntBASIC20.49■□□□□ 0.87
TRMT12Q53H54 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRMT12Q53H54 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.49■□□□□ 0.87
TRMT12Q53H54 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRMT12Q53H54 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRMT12Q53H54 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRMT12Q53H54 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.48■□□□□ 0.87
TRMT12Q53H54 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRMT12Q53H54 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.48■□□□□ 0.87
TRMT12Q53H54 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.48■□□□□ 0.87
TRMT12Q53H54 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms