Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5Q00535 AC005703.6-201ENST00000623265 1329 ntBASIC19.85■□□□□ 0.77
CDK5Q00535 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDK5Q00535 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5Q00535 AC103834.1-201ENST00000520383 144 ntBASIC19.85■□□□□ 0.77
CDK5Q00535 MIR6722-201ENST00000617286 78 ntBASIC19.85■□□□□ 0.77
CDK5Q00535 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.85■□□□□ 0.77
CDK5Q00535 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDK5Q00535 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDK5Q00535 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5Q00535 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5Q00535 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5Q00535 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDK5Q00535 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.84■□□□□ 0.77
CDK5Q00535 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.84■□□□□ 0.77
CDK5Q00535 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5Q00535 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5Q00535 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK5Q00535 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
CDK5Q00535 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK5Q00535 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5Q00535 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5Q00535 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5Q00535 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5Q00535 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.83■□□□□ 0.76
CDK5Q00535 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CDK5Q00535 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CDK5Q00535 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5Q00535 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK5Q00535 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5Q00535 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5Q00535 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5Q00535 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.82■□□□□ 0.76
CDK5Q00535 AC103724.3-201ENST00000564481 992 ntBASIC19.82■□□□□ 0.76
CDK5Q00535 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5Q00535 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDK5Q00535 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5Q00535 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5Q00535 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.82■□□□□ 0.76
CDK5Q00535 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDK5Q00535 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5Q00535 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDK5Q00535 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5Q00535 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDK5Q00535 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5Q00535 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5Q00535 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5Q00535 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5Q00535 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5Q00535 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK5Q00535 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.8■□□□□ 0.76
CDK5Q00535 CA15P2-201ENST00000611168 834 ntBASIC19.8■□□□□ 0.76
CDK5Q00535 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK5Q00535 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5Q00535 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK5Q00535 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDK5Q00535 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5Q00535 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5Q00535 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5Q00535 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5Q00535 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5Q00535 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5Q00535 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDK5Q00535 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5Q00535 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5Q00535 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.79■□□□□ 0.76
CDK5Q00535 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5Q00535 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5Q00535 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK5Q00535 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK5Q00535 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5Q00535 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5Q00535 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK5Q00535 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5Q00535 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDK5Q00535 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms