Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.66■■□□□ 1.7
HMGCS2P54868 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HMGCS2P54868 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HMGCS2P54868 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.66■■□□□ 1.7
HMGCS2P54868 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HMGCS2P54868 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HMGCS2P54868 AC004812.2-201ENST00000611079 2094 ntBASIC25.66■■□□□ 1.7
HMGCS2P54868 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HMGCS2P54868 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.66■■□□□ 1.7
HMGCS2P54868 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
HMGCS2P54868 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.66■■□□□ 1.7
HMGCS2P54868 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HMGCS2P54868 LINC00543-201ENST00000567234 1845 ntBASIC25.65■■□□□ 1.7
HMGCS2P54868 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.65■■□□□ 1.7
HMGCS2P54868 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HMGCS2P54868 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.65■■□□□ 1.7
HMGCS2P54868 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
HMGCS2P54868 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.65■■□□□ 1.7
HMGCS2P54868 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.65■■□□□ 1.7
HMGCS2P54868 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
HMGCS2P54868 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.65■■□□□ 1.7
HMGCS2P54868 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
HMGCS2P54868 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
HMGCS2P54868 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
HMGCS2P54868 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
HMGCS2P54868 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.64■■□□□ 1.69
HMGCS2P54868 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.64■■□□□ 1.69
HMGCS2P54868 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
HMGCS2P54868 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
HMGCS2P54868 AL353803.4-201ENST00000565882 1934 ntBASIC25.63■■□□□ 1.69
HMGCS2P54868 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HMGCS2P54868 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HMGCS2P54868 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
HMGCS2P54868 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.63■■□□□ 1.69
HMGCS2P54868 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.63■■□□□ 1.69
HMGCS2P54868 RAP2CP1-201ENST00000605103 478 ntBASIC25.63■■□□□ 1.69
HMGCS2P54868 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
HMGCS2P54868 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
HMGCS2P54868 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HMGCS2P54868 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.62■■□□□ 1.69
HMGCS2P54868 CDCA4P2-201ENST00000441182 718 ntBASIC25.62■■□□□ 1.69
HMGCS2P54868 SMUG1P1-201ENST00000590640 811 ntBASIC25.62■■□□□ 1.69
HMGCS2P54868 AC068587.7-201ENST00000641602 218 ntBASIC25.62■■□□□ 1.69
HMGCS2P54868 AC073111.5-205ENST00000641717 521 ntBASIC25.62■■□□□ 1.69
HMGCS2P54868 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HMGCS2P54868 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
HMGCS2P54868 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HMGCS2P54868 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HMGCS2P54868 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HMGCS2P54868 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
HMGCS2P54868 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HMGCS2P54868 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.61■■□□□ 1.69
HMGCS2P54868 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.61■■□□□ 1.69
HMGCS2P54868 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.61■■□□□ 1.69
HMGCS2P54868 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HMGCS2P54868 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HMGCS2P54868 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.61■■□□□ 1.69
HMGCS2P54868 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.6■■□□□ 1.69
HMGCS2P54868 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.6■■□□□ 1.69
HMGCS2P54868 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.6■■□□□ 1.69
HMGCS2P54868 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.6■■□□□ 1.69
HMGCS2P54868 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.6■■□□□ 1.69
HMGCS2P54868 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.6■■□□□ 1.69
HMGCS2P54868 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HMGCS2P54868 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
HMGCS2P54868 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HMGCS2P54868 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.59■■□□□ 1.69
HMGCS2P54868 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
HMGCS2P54868 AC010141.3-201ENST00000456659 717 ntBASIC25.59■■□□□ 1.69
HMGCS2P54868 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.59■■□□□ 1.69
HMGCS2P54868 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HMGCS2P54868 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HMGCS2P54868 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.58■■□□□ 1.69
HMGCS2P54868 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.58■■□□□ 1.69
HMGCS2P54868 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HMGCS2P54868 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.58■■□□□ 1.69
HMGCS2P54868 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HMGCS2P54868 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HMGCS2P54868 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
HMGCS2P54868 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.58■■□□□ 1.69
HMGCS2P54868 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
HMGCS2P54868 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.58■■□□□ 1.68
HMGCS2P54868 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCS2P54868 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.57■■□□□ 1.68
HMGCS2P54868 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.57■■□□□ 1.68
HMGCS2P54868 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCS2P54868 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
HMGCS2P54868 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HMGCS2P54868 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.57■■□□□ 1.68
HMGCS2P54868 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.57■■□□□ 1.68
HMGCS2P54868 AC087239.1-201ENST00000622671 572 ntBASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms