Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YDR524W-CYDR524W-C 90 nt5.7□□□□□ -1.5
MSH3P25336 FOL2YGR267C 732 nt5.7□□□□□ -1.5
MSH3P25336 RPL27AYHR010W 411 nt5.7□□□□□ -1.5
MSH3P25336 GLG2YJL137C 1143 nt5.7□□□□□ -1.5
MSH3P25336 TPP1YMR156C 717 nt5.7□□□□□ -1.5
MSH3P25336 GAL10YBR019C 2100 nt5.7□□□□□ -1.5
MSH3P25336 YOR238WYOR238W 912 nt5.7□□□□□ -1.5
MSH3P25336 ATG5YPL149W 885 nt5.7□□□□□ -1.5
MSH3P25336 FDH2YPL275W 711 nt5.7□□□□□ -1.5
MSH3P25336 RIM15YFL033C 5313 nt5.7□□□□□ -1.5
MSH3P25336 MPP10YJR002W 1782 nt5.7□□□□□ -1.5
MSH3P25336 SIS2YKR072C 1689 nt5.69□□□□□ -1.5
MSH3P25336 YIG1YPL201C 1386 nt5.69□□□□□ -1.5
MSH3P25336 PHO8YDR481C 1701 nt5.69□□□□□ -1.5
MSH3P25336 OST5YGL226C-A 261 nt5.69□□□□□ -1.5
MSH3P25336 COG2YGR120C 789 nt5.69□□□□□ -1.5
MSH3P25336 PUS6YGR169C 1215 nt5.69□□□□□ -1.5
MSH3P25336 SWD2YKL018W 990 nt5.69□□□□□ -1.5
MSH3P25336 GMC2YLR445W 567 nt5.69□□□□□ -1.5
MSH3P25336 MAP2YBL091C 1266 nt5.69□□□□□ -1.5
MSH3P25336 GAL7YBR018C 1101 nt5.69□□□□□ -1.5
MSH3P25336 YBR219CYBR219C 384 nt5.69□□□□□ -1.5
MSH3P25336 DCC1YCL016C 1143 nt5.69□□□□□ -1.5
MSH3P25336 RGP1YDR137W 1992 nt5.69□□□□□ -1.5
MSH3P25336 CUE2YKL090W 1332 nt5.69□□□□□ -1.5
MSH3P25336 GGA1YDR358W 1674 nt5.69□□□□□ -1.5
MSH3P25336 MEC3YLR288C 1425 nt5.68□□□□□ -1.5
MSH3P25336 PRP18YGR006W 756 nt5.68□□□□□ -1.5
MSH3P25336 APQ13YJL075C 417 nt5.68□□□□□ -1.5
MSH3P25336 YNR061CYNR061C 660 nt5.68□□□□□ -1.5
MSH3P25336 ISU2YOR226C 471 nt5.68□□□□□ -1.5
MSH3P25336 TRS20YBR254C 528 nt5.68□□□□□ -1.5
MSH3P25336 GLT1YDL171C 6438 nt5.68□□□□□ -1.5
MSH3P25336 URK1YNR012W 1506 nt5.68□□□□□ -1.5
MSH3P25336 ATH1YPR026W 3636 nt5.68□□□□□ -1.5
MSH3P25336 CPS1YJL172W 1731 nt5.68□□□□□ -1.5
MSH3P25336 BCS1YDR375C 1371 nt5.67□□□□□ -1.5
MSH3P25336 MAL12YGR292W 1755 nt5.67□□□□□ -1.5
MSH3P25336 MAL32YBR299W 1755 nt5.67□□□□□ -1.5
MSH3P25336 RCK2YLR248W 1833 nt5.67□□□□□ -1.5
MSH3P25336 WTM2YOR229W 1404 nt5.67□□□□□ -1.5
MSH3P25336 RHB1YCR027C 630 nt5.67□□□□□ -1.5
MSH3P25336 ERD1YDR414C 1089 nt5.67□□□□□ -1.5
MSH3P25336 YBR196C-BYBR196C-B 105 nt5.67□□□□□ -1.5
MSH3P25336 STR2YJR130C 1920 nt5.67□□□□□ -1.5
MSH3P25336 SEO1YAL067C 1782 nt5.67□□□□□ -1.5
MSH3P25336 ARB1YER036C 1833 nt5.67□□□□□ -1.5
MSH3P25336 YDR203WYDR203W 318 nt5.66□□□□□ -1.5
MSH3P25336 MTC7YEL033W 420 nt5.66□□□□□ -1.5
MSH3P25336 YGR026WYGR026W 837 nt5.66□□□□□ -1.5
MSH3P25336 NAG1YGR031C-A 492 nt5.66□□□□□ -1.5
MSH3P25336 SGT1YOR057W 1188 nt5.66□□□□□ -1.5
MSH3P25336 VPS21YOR089C 633 nt5.66□□□□□ -1.5
MSH3P25336 HNT3YOR258W 654 nt5.66□□□□□ -1.5
MSH3P25336 YPL162CYPL162C 822 nt5.66□□□□□ -1.5
MSH3P25336 AVT3YKL146W 2079 nt5.66□□□□□ -1.5
MSH3P25336 MPH2YDL247W 1830 nt5.66□□□□□ -1.5
MSH3P25336 BI3Q0115 1554 nt5.66□□□□□ -1.5
MSH3P25336 SEC9YGR009C 1956 nt5.66□□□□□ -1.5
MSH3P25336 MMP1YLL061W 1752 nt5.65□□□□□ -1.5
MSH3P25336 YOR1YGR281W 4434 nt5.65□□□□□ -1.5
MSH3P25336 HMLALPHA2YCL067C 633 nt5.65□□□□□ -1.5
MSH3P25336 ADY2YCR010C 852 nt5.65□□□□□ -1.5
MSH3P25336 MATALPHA2YCR039C 633 nt5.65□□□□□ -1.5
MSH3P25336 URA3YEL021W 804 nt5.65□□□□□ -1.5
MSH3P25336 TYW3YGL050W 822 nt5.65□□□□□ -1.5
MSH3P25336 ZRT1YGL255W 1131 nt5.65□□□□□ -1.5
MSH3P25336 YIL025CYIL025C 375 nt5.65□□□□□ -1.5
MSH3P25336 AUR1YKL004W 1206 nt5.65□□□□□ -1.5
MSH3P25336 SAM37YMR060C 984 nt5.65□□□□□ -1.5
MSH3P25336 YMR099CYMR099C 894 nt5.65□□□□□ -1.5
MSH3P25336 ERD2YBL040C 660 nt5.65□□□□□ -1.5
MSH3P25336 MPP6YNR024W 561 nt5.65□□□□□ -1.5
MSH3P25336 RER2YBR002C 861 nt5.65□□□□□ -1.5
MSH3P25336 YOR338WYOR338W 1092 nt5.65□□□□□ -1.5
MSH3P25336 CMR3YPR013C 954 nt5.65□□□□□ -1.5
MSH3P25336 YBR071WYBR071W 636 nt5.65□□□□□ -1.5
MSH3P25336 MCH4YOL119C 1506 nt5.64□□□□□ -1.51
MSH3P25336 SPR28YDR218C 1272 nt5.64□□□□□ -1.51
MSH3P25336 YHR212W-AYHR212W-A 204 nt5.64□□□□□ -1.51
MSH3P25336 MMF1YIL051C 438 nt5.64□□□□□ -1.51
MSH3P25336 AIM22YJL046W 1230 nt5.64□□□□□ -1.51
MSH3P25336 YAR061WYAR061W 204 nt5.64□□□□□ -1.51
MSH3P25336 YLR347W-AYLR347W-A 141 nt5.64□□□□□ -1.51
MSH3P25336 PDX3YBR035C 687 nt5.64□□□□□ -1.51
MSH3P25336 CIN2YPL241C 807 nt5.64□□□□□ -1.51
MSH3P25336 VPS38YLR360W 1320 nt5.64□□□□□ -1.51
MSH3P25336 MSA1YOR066W 1890 nt5.64□□□□□ -1.51
MSH3P25336 STE7YDL159W 1548 nt5.64□□□□□ -1.51
MSH3P25336 PRR1YKL116C 1557 nt5.63□□□□□ -1.51
MSH3P25336 YGL036WYGL036W 2730 nt5.63□□□□□ -1.51
MSH3P25336 SMF1YOL122C 1728 nt5.63□□□□□ -1.51
MSH3P25336 NPL4YBR170C 1743 nt5.63□□□□□ -1.51
MSH3P25336 MOT2YER068W 1764 nt5.63□□□□□ -1.51
MSH3P25336 RPL13AYDL082W 600 nt5.63□□□□□ -1.51
MSH3P25336 SNU23YDL098C 585 nt5.63□□□□□ -1.51
MSH3P25336 RSM28YDR494W 1086 nt5.63□□□□□ -1.51
MSH3P25336 SCM4YGR049W 564 nt5.63□□□□□ -1.51
MSH3P25336 ERV29YGR284C 933 nt5.63□□□□□ -1.51
MSH3P25336 SVP26YHR181W 687 nt5.63□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 86.7 ms