Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.99■□□□□ 0.63
SFTPBP07988 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.99■□□□□ 0.63
SFTPBP07988 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SFTPBP07988 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SFTPBP07988 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SFTPBP07988 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SFTPBP07988 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SFTPBP07988 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SFTPBP07988 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.98■□□□□ 0.63
SFTPBP07988 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SFTPBP07988 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.98■□□□□ 0.63
SFTPBP07988 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SFTPBP07988 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.97■□□□□ 0.63
SFTPBP07988 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SFTPBP07988 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.97■□□□□ 0.63
SFTPBP07988 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.97■□□□□ 0.63
SFTPBP07988 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.97■□□□□ 0.63
SFTPBP07988 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SFTPBP07988 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 GUSBP5-202ENST00000510805 1989 ntBASIC18.97■□□□□ 0.63
SFTPBP07988 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SFTPBP07988 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SFTPBP07988 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.96■□□□□ 0.63
SFTPBP07988 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.96■□□□□ 0.63
SFTPBP07988 MIR6722-201ENST00000617286 78 ntBASIC18.96■□□□□ 0.63
SFTPBP07988 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.96■□□□□ 0.63
SFTPBP07988 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.96■□□□□ 0.63
SFTPBP07988 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SFTPBP07988 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SFTPBP07988 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.96■□□□□ 0.63
SFTPBP07988 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.96■□□□□ 0.63
SFTPBP07988 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SFTPBP07988 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.95■□□□□ 0.62
SFTPBP07988 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.95■□□□□ 0.62
SFTPBP07988 MIR6724-1-201ENST00000616420 92 ntBASIC18.95■□□□□ 0.62
SFTPBP07988 MIR6724-2-201ENST00000616483 92 ntBASIC18.95■□□□□ 0.62
SFTPBP07988 MIR6724-4-201ENST00000617390 92 ntBASIC18.95■□□□□ 0.62
SFTPBP07988 MIR6724-3-201ENST00000622482 92 ntBASIC18.95■□□□□ 0.62
SFTPBP07988 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.95■□□□□ 0.62
SFTPBP07988 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SFTPBP07988 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SFTPBP07988 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SFTPBP07988 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.94■□□□□ 0.62
SFTPBP07988 AC144652.1-201ENST00000609974 1624 ntBASIC18.94■□□□□ 0.62
SFTPBP07988 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SFTPBP07988 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SFTPBP07988 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SFTPBP07988 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.94■□□□□ 0.62
SFTPBP07988 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SFTPBP07988 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SFTPBP07988 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SFTPBP07988 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.94■□□□□ 0.62
SFTPBP07988 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.94■□□□□ 0.62
SFTPBP07988 AC008406.3-201ENST00000620001 1374 ntBASIC18.93■□□□□ 0.62
SFTPBP07988 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SFTPBP07988 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SFTPBP07988 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.93■□□□□ 0.62
SFTPBP07988 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.93■□□□□ 0.62
SFTPBP07988 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.93■□□□□ 0.62
SFTPBP07988 AL117332.1-201ENST00000622628 974 ntBASIC18.93■□□□□ 0.62
SFTPBP07988 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SFTPBP07988 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.93■□□□□ 0.62
SFTPBP07988 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SFTPBP07988 AC005703.6-201ENST00000623265 1329 ntBASIC18.93■□□□□ 0.62
SFTPBP07988 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SFTPBP07988 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SFTPBP07988 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.92■□□□□ 0.62
SFTPBP07988 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms