Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.23■□□□□ 0.51
CTSDP07339 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CTSDP07339 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTSDP07339 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.23■□□□□ 0.51
CTSDP07339 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTSDP07339 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CTSDP07339 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
CTSDP07339 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSDP07339 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSDP07339 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.22■□□□□ 0.51
CTSDP07339 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 ABHD17AP5-201ENST00000580133 923 ntBASIC18.22■□□□□ 0.51
CTSDP07339 AC129492.7-201ENST00000622992 756 ntBASIC18.22■□□□□ 0.51
CTSDP07339 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.22■□□□□ 0.51
CTSDP07339 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.22■□□□□ 0.51
CTSDP07339 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTSDP07339 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSDP07339 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CTSDP07339 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSDP07339 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSDP07339 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTSDP07339 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTSDP07339 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTSDP07339 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.21■□□□□ 0.51
CTSDP07339 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.2■□□□□ 0.5
CTSDP07339 SLC25A24-204ENST00000569674 2357 ntBASIC18.2■□□□□ 0.5
CTSDP07339 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSDP07339 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CTSDP07339 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSDP07339 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSDP07339 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSDP07339 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSDP07339 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.2■□□□□ 0.5
CTSDP07339 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.2■□□□□ 0.5
CTSDP07339 MIR4281-201ENST00000580852 62 ntBASIC18.2■□□□□ 0.5
CTSDP07339 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.2■□□□□ 0.5
CTSDP07339 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSDP07339 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CTSDP07339 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CTSDP07339 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CTSDP07339 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CTSDP07339 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSDP07339 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSDP07339 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.19■□□□□ 0.5
CTSDP07339 U85056.1-201ENST00000616429 682 ntBASIC18.19■□□□□ 0.5
CTSDP07339 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSDP07339 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSDP07339 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.19■□□□□ 0.5
CTSDP07339 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTSDP07339 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTSDP07339 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CTSDP07339 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSDP07339 LINC01960-201ENST00000563759 1884 ntBASIC18.18■□□□□ 0.5
CTSDP07339 AC244015.2-201ENST00000616358 1861 ntBASIC18.18■□□□□ 0.5
CTSDP07339 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSDP07339 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSDP07339 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.18■□□□□ 0.5
CTSDP07339 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CTSDP07339 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.18■□□□□ 0.5
CTSDP07339 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSDP07339 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.18■□□□□ 0.5
CTSDP07339 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CTSDP07339 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSDP07339 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSDP07339 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTSDP07339 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTSDP07339 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.17■□□□□ 0.5
CTSDP07339 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTSDP07339 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CTSDP07339 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 LINC01529-204ENST00000636474 1715 ntBASIC18.17■□□□□ 0.5
CTSDP07339 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CTSDP07339 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CTSDP07339 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSDP07339 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSDP07339 AC005229.4-201ENST00000610085 2198 ntBASIC18.16■□□□□ 0.5
CTSDP07339 KRT18P24-201ENST00000344739 1156 ntBASIC18.16■□□□□ 0.5
CTSDP07339 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSDP07339 AC139795.1-202ENST00000500444 432 ntBASIC18.16■□□□□ 0.5
CTSDP07339 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSDP07339 THA1P-201ENST00000590384 1145 ntBASIC18.16■□□□□ 0.5
CTSDP07339 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSDP07339 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTSDP07339 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms