Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
KRT28Q7Z3Y7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 CD99P1-205ENST00000527459 561 ntBASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 TESC-206ENST00000541210 936 ntTSL 3 BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KRT28Q7Z3Y7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KRT28Q7Z3Y7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
KRT28Q7Z3Y7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
KRT28Q7Z3Y7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.31■■■□□ 2.44
KRT28Q7Z3Y7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KRT28Q7Z3Y7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 KRT18P11-201ENST00000435214 1283 ntBASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 AC066615.1-201ENST00000640911 628 ntBASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.3■■■□□ 2.44
KRT28Q7Z3Y7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
KRT28Q7Z3Y7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC30.29■■■□□ 2.44
KRT28Q7Z3Y7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KRT28Q7Z3Y7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC30.29■■■□□ 2.44
KRT28Q7Z3Y7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
KRT28Q7Z3Y7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC30.28■■■□□ 2.44
KRT28Q7Z3Y7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC30.28■■■□□ 2.44
KRT28Q7Z3Y7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC30.28■■■□□ 2.44
KRT28Q7Z3Y7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
KRT28Q7Z3Y7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
KRT28Q7Z3Y7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 APTR-205ENST00000447009 902 ntTSL 2 BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 TSPY20P-201ENST00000450910 630 ntBASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 AC142086.2-201ENST00000569753 217 ntBASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 SMUG1P1-201ENST00000590640 811 ntBASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 MDK-213ENST00000617138 635 ntTSL 2 BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.27■■■□□ 2.44
KRT28Q7Z3Y7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
KRT28Q7Z3Y7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
KRT28Q7Z3Y7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC30.26■■■□□ 2.43
KRT28Q7Z3Y7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC30.26■■■□□ 2.43
KRT28Q7Z3Y7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KRT28Q7Z3Y7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KRT28Q7Z3Y7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC30.25■■■□□ 2.43
KRT28Q7Z3Y7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC30.24■■■□□ 2.43
KRT28Q7Z3Y7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
KRT28Q7Z3Y7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 AL050303.2-201ENST00000619798 666 ntBASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KRT28Q7Z3Y7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
KRT28Q7Z3Y7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.21■■■□□ 2.43
KRT28Q7Z3Y7 MFSD11-216ENST00000590393 1141 ntBASIC30.21■■■□□ 2.43
KRT28Q7Z3Y7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms