Protein–RNA interactions for Protein: P40489

XBP1, Transcriptional repressor XBP1, yeast

Predictions only

Length 647 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
XBP1	P40489	YPL162C	YPL162C	822 nt		4.33	□□□□□ -1.72
XBP1	P40489	ROT2	YBR229C	2865 nt		4.32	□□□□□ -1.72
XBP1	P40489	YTA12	YMR089C	2478 nt		4.32	□□□□□ -1.72
XBP1	P40489	RSC6	YCR052W	1452 nt		4.32	□□□□□ -1.72
XBP1	P40489	APL6	YGR261C	2430 nt		4.32	□□□□□ -1.72
XBP1	P40489	PSY4	YBL046W	1326 nt		4.32	□□□□□ -1.72
XBP1	P40489	YNL011C	YNL011C	1335 nt		4.32	□□□□□ -1.72
XBP1	P40489	CRD1	YDL142C	852 nt		4.32	□□□□□ -1.72
XBP1	P40489	YDR524W-C	YDR524W-C	90 nt		4.32	□□□□□ -1.72
XBP1	P40489	RPL28	YGL103W	450 nt		4.32	□□□□□ -1.72
XBP1	P40489	YHR175W-A	YHR175W-A	150 nt		4.32	□□□□□ -1.72
XBP1	P40489	SDS3	YIL084C	984 nt		4.32	□□□□□ -1.72
XBP1	P40489	GPI12	YMR281W	915 nt		4.32	□□□□□ -1.72
XBP1	P40489	MGR2	YPL098C	342 nt		4.32	□□□□□ -1.72
XBP1	P40489	YPR147C	YPR147C	915 nt		4.32	□□□□□ -1.72
XBP1	P40489	QCR2	YPR191W	1107 nt		4.32	□□□□□ -1.72
XBP1	P40489	YBR287W	YBR287W	1284 nt		4.32	□□□□□ -1.72
XBP1	P40489	TOS3	YGL179C	1683 nt		4.32	□□□□□ -1.72
XBP1	P40489	MEC3	YLR288C	1425 nt		4.31	□□□□□ -1.72
XBP1	P40489	MRS2	YOR334W	1413 nt		4.31	□□□□□ -1.72
XBP1	P40489	NSA1	YGL111W	1392 nt		4.31	□□□□□ -1.72
XBP1	P40489	COS7	YDL248W	1152 nt		4.31	□□□□□ -1.72
XBP1	P40489	YDR445C	YDR445C	408 nt		4.31	□□□□□ -1.72
XBP1	P40489	FAU1	YER183C	636 nt		4.31	□□□□□ -1.72
XBP1	P40489	YGR016W	YGR016W	573 nt		4.31	□□□□□ -1.72
XBP1	P40489	CAX4	YGR036C	720 nt		4.31	□□□□□ -1.72
XBP1	P40489	RPL24B	YGR148C	468 nt		4.31	□□□□□ -1.72
XBP1	P40489	SOL3	YHR163W	750 nt		4.31	□□□□□ -1.72
XBP1	P40489	YJL218W	YJL218W	591 nt		4.31	□□□□□ -1.72
XBP1	P40489	COS5	YJR161C	1152 nt		4.31	□□□□□ -1.72
XBP1	P40489	NYV1	YLR093C	762 nt		4.31	□□□□□ -1.72
XBP1	P40489	SRT1	YMR101C	1032 nt		4.31	□□□□□ -1.72
XBP1	P40489	NRK1	YNL129W	723 nt		4.31	□□□□□ -1.72
XBP1	P40489	BUD17	YNR027W	954 nt		4.31	□□□□□ -1.72
XBP1	P40489	TYE7	YOR344C	876 nt		4.31	□□□□□ -1.72
XBP1	P40489	CUP9	YPL177C	921 nt		4.31	□□□□□ -1.72
XBP1	P40489	CDC28	YBR160W	897 nt		4.31	□□□□□ -1.72
XBP1	P40489	CNA1	YLR433C	1662 nt		4.31	□□□□□ -1.72
XBP1	P40489	PRM1	YNL279W	1986 nt		4.31	□□□□□ -1.72
XBP1	P40489	YHR182W	YHR182W	2358 nt		4.31	□□□□□ -1.72
XBP1	P40489	TRM1	YDR120C	1713 nt		4.3	□□□□□ -1.72
XBP1	P40489	UBX7	YBR273C	1311 nt		4.3	□□□□□ -1.72
XBP1	P40489	CPR4	YCR069W	957 nt		4.3	□□□□□ -1.72
XBP1	P40489	ASP1	YDR321W	1146 nt		4.3	□□□□□ -1.72
XBP1	P40489	RPL22B	YFL034C-A	369 nt		4.3	□□□□□ -1.72
XBP1	P40489	RTA1	YGR213C	954 nt		4.3	□□□□□ -1.72
XBP1	P40489	PPX1	YHR201C	1194 nt		4.3	□□□□□ -1.72
XBP1	P40489	MBR1	YKL093W	1020 nt		4.3	□□□□□ -1.72
XBP1	P40489	KTI12	YKL110C	942 nt		4.3	□□□□□ -1.72
XBP1	P40489	RIF2	YLR453C	1188 nt		4.3	□□□□□ -1.72
XBP1	P40489	TEM1	YML064C	738 nt		4.3	□□□□□ -1.72
XBP1	P40489	YBL096C	YBL096C	309 nt		4.3	□□□□□ -1.72
XBP1	P40489	MED7	YOL135C	669 nt		4.3	□□□□□ -1.72
XBP1	P40489	IRC13	YOR235W	315 nt		4.3	□□□□□ -1.72
XBP1	P40489	RSA1	YPL193W	1146 nt		4.3	□□□□□ -1.72
XBP1	P40489	SPP381	YBR152W	876 nt		4.3	□□□□□ -1.72
XBP1	P40489	FUI1	YBL042C	1920 nt		4.3	□□□□□ -1.72
XBP1	P40489	MGA1	YGR249W	1371 nt		4.29	□□□□□ -1.72
XBP1	P40489	SMP1	YBR182C	1359 nt		4.29	□□□□□ -1.72
XBP1	P40489	ALG9	YNL219C	1668 nt		4.29	□□□□□ -1.72
XBP1	P40489	YNR066C	YNR066C	1311 nt		4.29	□□□□□ -1.72
XBP1	P40489	ERT1	YBR239C	1590 nt		4.29	□□□□□ -1.72
XBP1	P40489	YDL016C	YDL016C	303 nt		4.29	□□□□□ -1.72
XBP1	P40489	SLC1	YDL052C	912 nt		4.29	□□□□□ -1.72
XBP1	P40489	KIN28	YDL108W	921 nt		4.29	□□□□□ -1.72
XBP1	P40489	YDR008C	YDR008C	351 nt		4.29	□□□□□ -1.72
XBP1	P40489	AUA1	YFL010W-A	285 nt		4.29	□□□□□ -1.72
XBP1	P40489	RNA15	YGL044C	891 nt		4.29	□□□□□ -1.72
XBP1	P40489	YGR079W	YGR079W	1113 nt		4.29	□□□□□ -1.72
XBP1	P40489	COG2	YGR120C	789 nt		4.29	□□□□□ -1.72
XBP1	P40489	CKA1	YIL035C	1119 nt		4.29	□□□□□ -1.72
XBP1	P40489	VPS25	YJR102C	609 nt		4.29	□□□□□ -1.72
XBP1	P40489	BAT2	YJR148W	1131 nt		4.29	□□□□□ -1.72
XBP1	P40489	MRPL39	YML009C	213 nt		4.29	□□□□□ -1.72
XBP1	P40489	YNR062C	YNR062C	984 nt		4.29	□□□□□ -1.72
XBP1	P40489	TRM10	YOL093W	882 nt		4.29	□□□□□ -1.72
XBP1	P40489	MET31	YPL038W	534 nt		4.29	□□□□□ -1.72
XBP1	P40489	RXT2	YBR095C	1293 nt		4.29	□□□□□ -1.72
XBP1	P40489	snR44	snR44	211 nt		4.29	□□□□□ -1.72
XBP1	P40489	YCL012C	YCL012C	405 nt		4.29	□□□□□ -1.72
XBP1	P40489	ADE4	YMR300C	1533 nt		4.29	□□□□□ -1.72
XBP1	P40489	UBP9	YER098W	2265 nt		4.29	□□□□□ -1.72
XBP1	P40489	SIR1	YKR101W	1965 nt		4.29	□□□□□ -1.72
XBP1	P40489	SER3	YER081W	1410 nt		4.29	□□□□□ -1.72
XBP1	P40489	YTM1	YOR272W	1383 nt		4.28	□□□□□ -1.72
XBP1	P40489	SAG1	YJR004C	1953 nt		4.28	□□□□□ -1.72
XBP1	P40489	YDR056C	YDR056C	618 nt		4.28	□□□□□ -1.72
XBP1	P40489	ATC1	YDR184C	885 nt		4.28	□□□□□ -1.72
XBP1	P40489	SRB7	YDR308C	423 nt		4.28	□□□□□ -1.72
XBP1	P40489	YHR193C-A	YHR193C-A	375 nt		4.28	□□□□□ -1.72
XBP1	P40489	CCE1	YKL011C	1062 nt		4.28	□□□□□ -1.72
XBP1	P40489	RPP0	YLR340W	939 nt		4.28	□□□□□ -1.72
XBP1	P40489	VPS71	YML041C	843 nt		4.28	□□□□□ -1.72
XBP1	P40489	CUE5	YOR042W	1236 nt		4.28	□□□□□ -1.72
XBP1	P40489	USV1	YPL230W	1176 nt		4.28	□□□□□ -1.72
XBP1	P40489	HUT1	YPL244C	1020 nt		4.28	□□□□□ -1.72
XBP1	P40489	GPR1	YDL035C	2886 nt		4.28	□□□□□ -1.72
XBP1	P40489	GIP1	YBR045C	1920 nt		4.28	□□□□□ -1.72
XBP1	P40489	APC1	YNL172W	5247 nt		4.28	□□□□□ -1.73
XBP1	P40489	ADY3	YDL239C	2373 nt		4.27	□□□□□ -1.73

Retrieved 100 of 7,029 protein–RNA pairs in 61 ms