Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CD3DP04234 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.7■□□□□ 0.58
CD3DP04234 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CD3DP04234 AC011551.1-201ENST00000614101 683 ntBASIC18.7■□□□□ 0.58
CD3DP04234 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.7■□□□□ 0.58
CD3DP04234 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CD3DP04234 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.7■□□□□ 0.58
CD3DP04234 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD3DP04234 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD3DP04234 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CD3DP04234 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD3DP04234 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD3DP04234 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD3DP04234 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.69■□□□□ 0.58
CD3DP04234 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD3DP04234 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD3DP04234 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD3DP04234 SPCS2P3-201ENST00000500401 656 ntBASIC18.69■□□□□ 0.58
CD3DP04234 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD3DP04234 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD3DP04234 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.69■□□□□ 0.58
CD3DP04234 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD3DP04234 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.68■□□□□ 0.58
CD3DP04234 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD3DP04234 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CD3DP04234 MIR639-201ENST00000384974 98 ntBASIC18.68■□□□□ 0.58
CD3DP04234 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.68■□□□□ 0.58
CD3DP04234 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CD3DP04234 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.68■□□□□ 0.58
CD3DP04234 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CD3DP04234 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD3DP04234 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.67■□□□□ 0.58
CD3DP04234 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CD3DP04234 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.67■□□□□ 0.58
CD3DP04234 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD3DP04234 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD3DP04234 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.66■□□□□ 0.58
CD3DP04234 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD3DP04234 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD3DP04234 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD3DP04234 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD3DP04234 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.66■□□□□ 0.58
CD3DP04234 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CD3DP04234 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.65■□□□□ 0.58
CD3DP04234 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CD3DP04234 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD3DP04234 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CD3DP04234 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.64■□□□□ 0.58
CD3DP04234 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD3DP04234 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD3DP04234 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CD3DP04234 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD3DP04234 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD3DP04234 LONRF2P2-201ENST00000439212 571 ntBASIC18.64■□□□□ 0.57
CD3DP04234 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CD3DP04234 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD3DP04234 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.64■□□□□ 0.57
CD3DP04234 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD3DP04234 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CD3DP04234 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
CD3DP04234 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CD3DP04234 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CD3DP04234 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD3DP04234 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD3DP04234 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD3DP04234 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.63■□□□□ 0.57
CD3DP04234 GPX1-201ENST00000419349 1106 ntBASIC18.63■□□□□ 0.57
CD3DP04234 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD3DP04234 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.63■□□□□ 0.57
CD3DP04234 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.63■□□□□ 0.57
CD3DP04234 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD3DP04234 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms