Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SPDYE3A6NKU9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.18■■□□□ 1.62
SPDYE3A6NKU9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.18■■□□□ 1.62
SPDYE3A6NKU9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.18■■□□□ 1.62
SPDYE3A6NKU9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.18■■□□□ 1.62
SPDYE3A6NKU9 DUSP8P3-201ENST00000399571 1760 ntBASIC25.18■■□□□ 1.62
SPDYE3A6NKU9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
SPDYE3A6NKU9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 TSPY26P-201ENST00000476365 1326 ntBASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SPDYE3A6NKU9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 IGHV3-19-201ENST00000521488 291 ntBASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.15■■□□□ 1.62
SPDYE3A6NKU9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPDYE3A6NKU9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SPDYE3A6NKU9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.14■■□□□ 1.62
SPDYE3A6NKU9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SPDYE3A6NKU9 AP005435.1-201ENST00000529293 1178 ntBASIC25.14■■□□□ 1.62
SPDYE3A6NKU9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SPDYE3A6NKU9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SPDYE3A6NKU9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SPDYE3A6NKU9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
SPDYE3A6NKU9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SPDYE3A6NKU9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SPDYE3A6NKU9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 IRS3P-201ENST00000223076 1006 ntBASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 MIR935-201ENST00000401179 91 ntBASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SPDYE3A6NKU9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE3A6NKU9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SPDYE3A6NKU9 AC068587.7-201ENST00000641602 218 ntBASIC25.1■■□□□ 1.61
SPDYE3A6NKU9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE3A6NKU9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE3A6NKU9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE3A6NKU9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms