Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC026310.3-201ENST00000625186 2373 ntBASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC010542.4-201ENST00000563151 1910 ntBASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-5A0A0J9YX44 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-5A0A0J9YX44 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 LINC01960-201ENST00000563759 1884 ntBASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 FAM99A-202ENST00000538190 1989 ntBASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 MIR4508-201ENST00000584178 70 ntBASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV5-5A0A0J9YX44 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRBV5-5A0A0J9YX44 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV5-5A0A0J9YX44 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.14■□□□□ 0.66
TRBV5-5A0A0J9YX44 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRBV5-5A0A0J9YX44 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 AC009086.3-201ENST00000623486 1008 ntBASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV5-5A0A0J9YX44 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 DUX4L4-201ENST00000566884 1269 ntBASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.12■□□□□ 0.65
TRBV5-5A0A0J9YX44 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms