Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.11■■□□□ 1.45
CDT1Q9H211 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDT1Q9H211 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDT1Q9H211 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDT1Q9H211 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDT1Q9H211 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.11■■□□□ 1.45
CDT1Q9H211 AC126544.1-201ENST00000580842 1059 ntBASIC24.11■■□□□ 1.45
CDT1Q9H211 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDT1Q9H211 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.11■■□□□ 1.45
CDT1Q9H211 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDT1Q9H211 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.11■■□□□ 1.45
CDT1Q9H211 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDT1Q9H211 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDT1Q9H211 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDT1Q9H211 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDT1Q9H211 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.1■■□□□ 1.45
CDT1Q9H211 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDT1Q9H211 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CDT1Q9H211 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.1■■□□□ 1.45
CDT1Q9H211 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.1■■□□□ 1.45
CDT1Q9H211 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDT1Q9H211 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDT1Q9H211 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CDT1Q9H211 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDT1Q9H211 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.1■■□□□ 1.45
CDT1Q9H211 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.1■■□□□ 1.45
CDT1Q9H211 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDT1Q9H211 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CDT1Q9H211 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.09■■□□□ 1.45
CDT1Q9H211 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
CDT1Q9H211 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.09■■□□□ 1.45
CDT1Q9H211 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CDT1Q9H211 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDT1Q9H211 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDT1Q9H211 MIR935-201ENST00000401179 91 ntBASIC24.08■■□□□ 1.45
CDT1Q9H211 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDT1Q9H211 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDT1Q9H211 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CDT1Q9H211 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDT1Q9H211 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.07■■□□□ 1.44
CDT1Q9H211 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDT1Q9H211 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDT1Q9H211 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDT1Q9H211 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CDT1Q9H211 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CDT1Q9H211 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDT1Q9H211 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CDT1Q9H211 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.06■■□□□ 1.44
CDT1Q9H211 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDT1Q9H211 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CDT1Q9H211 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDT1Q9H211 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDT1Q9H211 DUSP8P3-201ENST00000399571 1760 ntBASIC24.06■■□□□ 1.44
CDT1Q9H211 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDT1Q9H211 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDT1Q9H211 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDT1Q9H211 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.05■■□□□ 1.44
CDT1Q9H211 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.05■■□□□ 1.44
CDT1Q9H211 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.05■■□□□ 1.44
CDT1Q9H211 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
CDT1Q9H211 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CDT1Q9H211 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.05■■□□□ 1.44
CDT1Q9H211 TSPY26P-201ENST00000476365 1326 ntBASIC24.05■■□□□ 1.44
CDT1Q9H211 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDT1Q9H211 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDT1Q9H211 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
CDT1Q9H211 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.05■■□□□ 1.44
CDT1Q9H211 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDT1Q9H211 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDT1Q9H211 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.04■■□□□ 1.44
CDT1Q9H211 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.04■■□□□ 1.44
CDT1Q9H211 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDT1Q9H211 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDT1Q9H211 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CDT1Q9H211 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDT1Q9H211 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.04■■□□□ 1.44
CDT1Q9H211 IGHV3-19-201ENST00000521488 291 ntBASIC24.04■■□□□ 1.44
CDT1Q9H211 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.04■■□□□ 1.44
CDT1Q9H211 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDT1Q9H211 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDT1Q9H211 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CDT1Q9H211 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.03■■□□□ 1.44
CDT1Q9H211 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CDT1Q9H211 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.03■■□□□ 1.44
CDT1Q9H211 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.03■■□□□ 1.44
CDT1Q9H211 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.03■■□□□ 1.44
CDT1Q9H211 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDT1Q9H211 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CDT1Q9H211 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.03■■□□□ 1.44
CDT1Q9H211 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDT1Q9H211 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDT1Q9H211 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CDT1Q9H211 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms