Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YIPF4Q9BSR8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
YIPF4Q9BSR8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.77■□□□□ 0.91
YIPF4Q9BSR8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YIPF4Q9BSR8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YIPF4Q9BSR8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YIPF4Q9BSR8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.75■□□□□ 0.91
YIPF4Q9BSR8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.75■□□□□ 0.91
YIPF4Q9BSR8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
YIPF4Q9BSR8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.74■□□□□ 0.91
YIPF4Q9BSR8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
YIPF4Q9BSR8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 FP325331.1-202ENST00000623531 1380 ntBASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 AL117328.2-201ENST00000624617 1940 ntBASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
YIPF4Q9BSR8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.71■□□□□ 0.91
YIPF4Q9BSR8 EP400NL-214ENST00000641289 2402 ntBASIC20.7■□□□□ 0.91
YIPF4Q9BSR8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.7■□□□□ 0.91
YIPF4Q9BSR8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 C17orf82-201ENST00000623772 1530 ntBASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
YIPF4Q9BSR8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 AL117332.1-201ENST00000622628 974 ntBASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.69■□□□□ 0.9
YIPF4Q9BSR8 GUSBP5-202ENST00000510805 1989 ntBASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
YIPF4Q9BSR8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms