Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 DUX4L9-201ENST00000449051 1259 ntBASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 AL353803.4-201ENST00000565882 1934 ntBASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC71LQ8N9Z2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 AC022616.5-201ENST00000518796 181 ntBASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC71LQ8N9Z2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 RNF126P1-201ENST00000567452 1320 ntBASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC71LQ8N9Z2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC71LQ8N9Z2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC71LQ8N9Z2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 MIR4449-201ENST00000578365 66 ntBASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC71LQ8N9Z2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71LQ8N9Z2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC71LQ8N9Z2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms