Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.36■■■□□ 2.13
CCDC30Q5VVM6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.35■■■□□ 2.13
CCDC30Q5VVM6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCDC30Q5VVM6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC30Q5VVM6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCDC30Q5VVM6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
CCDC30Q5VVM6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.33■■■□□ 2.13
CCDC30Q5VVM6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.33■■■□□ 2.13
CCDC30Q5VVM6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC28.33■■■□□ 2.13
CCDC30Q5VVM6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.33■■■□□ 2.13
CCDC30Q5VVM6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
CCDC30Q5VVM6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC30Q5VVM6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
CCDC30Q5VVM6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCDC30Q5VVM6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
CCDC30Q5VVM6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC30Q5VVM6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
CCDC30Q5VVM6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.31■■■□□ 2.12
CCDC30Q5VVM6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
CCDC30Q5VVM6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
CCDC30Q5VVM6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC30Q5VVM6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCDC30Q5VVM6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.3■■■□□ 2.12
CCDC30Q5VVM6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC30Q5VVM6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC30Q5VVM6 DUSP8P3-201ENST00000399571 1760 ntBASIC28.3■■■□□ 2.12
CCDC30Q5VVM6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC30Q5VVM6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC30Q5VVM6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCDC30Q5VVM6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 AP005435.1-201ENST00000529293 1178 ntBASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
CCDC30Q5VVM6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC30Q5VVM6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC30Q5VVM6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC30Q5VVM6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCDC30Q5VVM6 IGHV3-19-201ENST00000521488 291 ntBASIC28.28■■■□□ 2.12
CCDC30Q5VVM6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.28■■■□□ 2.12
CCDC30Q5VVM6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 TSPY26P-201ENST00000476365 1326 ntBASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 MIR935-201ENST00000401179 91 ntBASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
CCDC30Q5VVM6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.26■■■□□ 2.12
CCDC30Q5VVM6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
CCDC30Q5VVM6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
CCDC30Q5VVM6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CCDC30Q5VVM6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.26■■■□□ 2.11
CCDC30Q5VVM6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.26■■■□□ 2.11
CCDC30Q5VVM6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.26■■■□□ 2.11
CCDC30Q5VVM6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms