Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 REC102YLR329W 795 nt5.85□□□□□ -1.47
MSH3P25336 YMR030W-AYMR030W-A 291 nt5.85□□□□□ -1.47
MSH3P25336 SHE1YBL031W 1017 nt5.85□□□□□ -1.47
MSH3P25336 LEM3YNL323W 1245 nt5.85□□□□□ -1.47
MSH3P25336 CYC2YOR037W 1101 nt5.85□□□□□ -1.47
MSH3P25336 RRP7YCL031C 894 nt5.85□□□□□ -1.47
MSH3P25336 NGR1YBR212W 2019 nt5.85□□□□□ -1.47
MSH3P25336 NOT3YIL038C 2511 nt5.85□□□□□ -1.47
MSH3P25336 SEC39YLR440C 2130 nt5.84□□□□□ -1.47
MSH3P25336 RSC30YHR056C 2652 nt5.84□□□□□ -1.47
MSH3P25336 PCL8YPL219W 1479 nt5.84□□□□□ -1.47
MSH3P25336 MRS2YOR334W 1413 nt5.84□□□□□ -1.47
MSH3P25336 DFG5YMR238W 1377 nt5.84□□□□□ -1.47
MSH3P25336 PST1YDR055W 1335 nt5.84□□□□□ -1.47
MSH3P25336 PCI8YIL071C 1335 nt5.84□□□□□ -1.47
MSH3P25336 CPR4YCR069W 957 nt5.84□□□□□ -1.47
MSH3P25336 MHF2YDL160C-A 243 nt5.84□□□□□ -1.47
MSH3P25336 MEI4YER044C-A 1227 nt5.84□□□□□ -1.47
MSH3P25336 YGR079WYGR079W 1113 nt5.84□□□□□ -1.47
MSH3P25336 MTW1YAL034W-A 870 nt5.84□□□□□ -1.47
MSH3P25336 DCN1YLR128W 810 nt5.84□□□□□ -1.47
MSH3P25336 SSP120YLR250W 705 nt5.84□□□□□ -1.47
MSH3P25336 SFH1YLR321C 1281 nt5.84□□□□□ -1.47
MSH3P25336 GPM3YOL056W 912 nt5.84□□□□□ -1.47
MSH3P25336 YOL097W-AYOL097W-A 186 nt5.84□□□□□ -1.47
MSH3P25336 YOR283WYOR283W 693 nt5.84□□□□□ -1.47
MSH3P25336 YPR147CYPR147C 915 nt5.84□□□□□ -1.47
MSH3P25336 CIK1YMR198W 1785 nt5.84□□□□□ -1.47
MSH3P25336 BIT2YBR270C 1638 nt5.84□□□□□ -1.47
MSH3P25336 CLA4YNL298W 2529 nt5.84□□□□□ -1.47
MSH3P25336 DAK1YML070W 1755 nt5.83□□□□□ -1.48
MSH3P25336 YDR179W-AYDR179W-A 1392 nt5.83□□□□□ -1.48
MSH3P25336 YHR177WYHR177W 1362 nt5.83□□□□□ -1.48
MSH3P25336 ULA1YPL003W 1389 nt5.83□□□□□ -1.48
MSH3P25336 SPT14YPL175W 1359 nt5.83□□□□□ -1.48
MSH3P25336 HXT4YHR092C 1731 nt5.83□□□□□ -1.48
MSH3P25336 YNL011CYNL011C 1335 nt5.83□□□□□ -1.48
MSH3P25336 TFC7YOR110W 1308 nt5.83□□□□□ -1.48
MSH3P25336 NHP10YDL002C 612 nt5.83□□□□□ -1.48
MSH3P25336 COBQ0105 1158 nt5.83□□□□□ -1.48
MSH3P25336 RNA15YGL044C 891 nt5.83□□□□□ -1.48
MSH3P25336 YGL117WYGL117W 798 nt5.83□□□□□ -1.48
MSH3P25336 TYS1YGR185C 1185 nt5.83□□□□□ -1.48
MSH3P25336 YGR226CYGR226C 210 nt5.83□□□□□ -1.48
MSH3P25336 BAT2YJR148W 1131 nt5.83□□□□□ -1.48
MSH3P25336 RUF22RUF22 515 nt5.83□□□□□ -1.48
MSH3P25336 RPA49YNL248C 1248 nt5.83□□□□□ -1.48
MSH3P25336 PWR1PWR1 941 nt5.83□□□□□ -1.48
MSH3P25336 GPR1YDL035C 2886 nt5.83□□□□□ -1.48
MSH3P25336 GCR2YNL199C 1605 nt5.82□□□□□ -1.48
MSH3P25336 SUP45YBR143C 1314 nt5.82□□□□□ -1.48
MSH3P25336 YAP6YDR259C 1152 nt5.82□□□□□ -1.48
MSH3P25336 YGL132WYGL132W 336 nt5.82□□□□□ -1.48
MSH3P25336 ECT1YGR007W 972 nt5.82□□□□□ -1.48
MSH3P25336 PEX18YHR160C 852 nt5.82□□□□□ -1.48
MSH3P25336 PPX1YHR201C 1194 nt5.82□□□□□ -1.48
MSH3P25336 YIL028WYIL028W 399 nt5.82□□□□□ -1.48
MSH3P25336 snR11snR11 258 nt5.82□□□□□ -1.48
MSH3P25336 YOR364WYOR364W 369 nt5.82□□□□□ -1.48
MSH3P25336 NAT3YPR131C 588 nt5.82□□□□□ -1.48
MSH3P25336 TPS3YMR261C 3165 nt5.82□□□□□ -1.48
MSH3P25336 SLI1YGR212W 1407 nt5.82□□□□□ -1.48
MSH3P25336 HAP1YLR256W 4509 nt5.81□□□□□ -1.48
MSH3P25336 TMN2YDR107C 2019 nt5.81□□□□□ -1.48
MSH3P25336 HXT5YHR096C 1779 nt5.81□□□□□ -1.48
MSH3P25336 SPC97YHR172W 2472 nt5.81□□□□□ -1.48
MSH3P25336 CRD1YDL142C 852 nt5.81□□□□□ -1.48
MSH3P25336 SPT15YER148W 723 nt5.81□□□□□ -1.48
MSH3P25336 MBR1YKL093W 1020 nt5.81□□□□□ -1.48
MSH3P25336 GCD7YLR291C 1146 nt5.81□□□□□ -1.48
MSH3P25336 DAL82YNL314W 768 nt5.81□□□□□ -1.48
MSH3P25336 YNG1YOR064C 660 nt5.81□□□□□ -1.48
MSH3P25336 BUD21YOR078W 645 nt5.81□□□□□ -1.48
MSH3P25336 TOS3YGL179C 1683 nt5.81□□□□□ -1.48
MSH3P25336 ATG20YDL113C 1923 nt5.8□□□□□ -1.48
MSH3P25336 KIP2YPL155C 2121 nt5.8□□□□□ -1.48
MSH3P25336 YEL010WYEL010W 351 nt5.8□□□□□ -1.48
MSH3P25336 MPO1YGL010W 525 nt5.8□□□□□ -1.48
MSH3P25336 MTC2YKL098W 1074 nt5.8□□□□□ -1.48
MSH3P25336 YNR062CYNR062C 984 nt5.8□□□□□ -1.48
MSH3P25336 HUT1YPL244C 1020 nt5.8□□□□□ -1.48
MSH3P25336 IMA3YIL172C 1770 nt5.8□□□□□ -1.48
MSH3P25336 IMA4YJL221C 1770 nt5.8□□□□□ -1.48
MSH3P25336 PDI1YCL043C 1569 nt5.8□□□□□ -1.48
MSH3P25336 RTT106YNL206C 1368 nt5.8□□□□□ -1.48
MSH3P25336 MIG1YGL035C 1515 nt5.79□□□□□ -1.48
MSH3P25336 EAR1YMR171C 1653 nt5.79□□□□□ -1.48
MSH3P25336 REF2YDR195W 1602 nt5.79□□□□□ -1.48
MSH3P25336 RSM10YDR041W 612 nt5.79□□□□□ -1.48
MSH3P25336 PET100YDR079W 336 nt5.79□□□□□ -1.48
MSH3P25336 ATC1YDR184C 885 nt5.79□□□□□ -1.48
MSH3P25336 TLG1YDR468C 675 nt5.79□□□□□ -1.48
MSH3P25336 YLR462WYLR462W 609 nt5.79□□□□□ -1.48
MSH3P25336 YIM1YMR152W 1098 nt5.79□□□□□ -1.48
MSH3P25336 NRK1YNL129W 723 nt5.79□□□□□ -1.48
MSH3P25336 snR10snR10 245 nt5.79□□□□□ -1.48
MSH3P25336 YPR202WYPR202W 717 nt5.79□□□□□ -1.48
MSH3P25336 YCL007CYCL007C 393 nt5.79□□□□□ -1.48
MSH3P25336 MDM38YOL027C 1722 nt5.79□□□□□ -1.48
MSH3P25336 MET3YJR010W 1536 nt5.79□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 65.9 ms