Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DOAP06340 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DOAP06340 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DOAP06340 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DOAP06340 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DOAP06340 AC004687.1-201ENST00000579003 1625 ntBASIC26.24■■□□□ 1.79
HLA-DOAP06340 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DOAP06340 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.24■■□□□ 1.79
HLA-DOAP06340 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DOAP06340 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DOAP06340 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.23■■□□□ 1.79
HLA-DOAP06340 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DOAP06340 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
HLA-DOAP06340 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DOAP06340 AC123595.1-201ENST00000440769 1046 ntBASIC26.23■■□□□ 1.79
HLA-DOAP06340 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.23■■□□□ 1.79
HLA-DOAP06340 AL031602.1-201ENST00000633169 911 ntBASIC26.23■■□□□ 1.79
HLA-DOAP06340 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
HLA-DOAP06340 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.23■■□□□ 1.79
HLA-DOAP06340 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.23■■□□□ 1.79
HLA-DOAP06340 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.23■■□□□ 1.79
HLA-DOAP06340 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
HLA-DOAP06340 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.22■■□□□ 1.79
HLA-DOAP06340 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DOAP06340 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.22■■□□□ 1.79
HLA-DOAP06340 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DOAP06340 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
HLA-DOAP06340 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DOAP06340 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DOAP06340 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DOAP06340 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC26.21■■□□□ 1.79
HLA-DOAP06340 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
HLA-DOAP06340 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DOAP06340 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DOAP06340 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
HLA-DOAP06340 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
HLA-DOAP06340 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
HLA-DOAP06340 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.2■■□□□ 1.78
HLA-DOAP06340 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.2■■□□□ 1.78
HLA-DOAP06340 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.2■■□□□ 1.78
HLA-DOAP06340 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HLA-DOAP06340 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
HLA-DOAP06340 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
HLA-DOAP06340 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.19■■□□□ 1.78
HLA-DOAP06340 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.19■■□□□ 1.78
HLA-DOAP06340 AC105233.4-201ENST00000642045 216 ntBASIC26.19■■□□□ 1.78
HLA-DOAP06340 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
HLA-DOAP06340 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
HLA-DOAP06340 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
HLA-DOAP06340 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
HLA-DOAP06340 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
HLA-DOAP06340 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DOAP06340 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DOAP06340 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DOAP06340 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.18■■□□□ 1.78
HLA-DOAP06340 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DOAP06340 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.18■■□□□ 1.78
HLA-DOAP06340 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.18■■□□□ 1.78
HLA-DOAP06340 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.18■■□□□ 1.78
HLA-DOAP06340 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DOAP06340 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DOAP06340 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HLA-DOAP06340 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
HLA-DOAP06340 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
HLA-DOAP06340 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
HLA-DOAP06340 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.17■■□□□ 1.78
HLA-DOAP06340 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
HLA-DOAP06340 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
HLA-DOAP06340 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
HLA-DOAP06340 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
HLA-DOAP06340 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.16■■□□□ 1.78
HLA-DOAP06340 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
HLA-DOAP06340 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.16■■□□□ 1.78
HLA-DOAP06340 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.16■■□□□ 1.78
HLA-DOAP06340 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.16■■□□□ 1.78
HLA-DOAP06340 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
HLA-DOAP06340 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.16■■□□□ 1.78
HLA-DOAP06340 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
HLA-DOAP06340 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4L2-201ENST00000561772 1275 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4L6-201ENST00000626483 1275 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4L1-201ENST00000627662 1275 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4L8-201ENST00000629013 1275 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4L3-201ENST00000630187 1275 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4L7-201ENST00000630678 1275 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 DUX4L5-201ENST00000630834 1275 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 AC068587.7-201ENST00000641602 218 ntBASIC26.16■■□□□ 1.78
HLA-DOAP06340 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
HLA-DOAP06340 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.15■■□□□ 1.78
HLA-DOAP06340 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
HLA-DOAP06340 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms