Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD3DP04234 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.78■□□□□ 0.6
CD3DP04234 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD3DP04234 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CD3DP04234 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CD3DP04234 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD3DP04234 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD3DP04234 AC087742.1-201ENST00000575880 1738 ntBASIC18.78■□□□□ 0.6
CD3DP04234 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD3DP04234 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.78■□□□□ 0.6
CD3DP04234 AC133552.2-201ENST00000619106 1032 ntBASIC18.78■□□□□ 0.6
CD3DP04234 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CD3DP04234 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD3DP04234 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD3DP04234 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.78■□□□□ 0.6
CD3DP04234 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD3DP04234 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.78■□□□□ 0.6
CD3DP04234 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 FAM99A-202ENST00000538190 1989 ntBASIC18.77■□□□□ 0.6
CD3DP04234 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.77■□□□□ 0.6
CD3DP04234 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.77■□□□□ 0.6
CD3DP04234 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CD3DP04234 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD3DP04234 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CD3DP04234 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CD3DP04234 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.77■□□□□ 0.59
CD3DP04234 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.76■□□□□ 0.59
CD3DP04234 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD3DP04234 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD3DP04234 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.76■□□□□ 0.59
CD3DP04234 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CD3DP04234 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD3DP04234 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CD3DP04234 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD3DP04234 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD3DP04234 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CD3DP04234 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD3DP04234 AC087393.1-201ENST00000582896 145 ntBASIC18.75■□□□□ 0.59
CD3DP04234 AC018755.3-202ENST00000596210 929 ntBASIC18.75■□□□□ 0.59
CD3DP04234 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD3DP04234 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.75■□□□□ 0.59
CD3DP04234 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.75■□□□□ 0.59
CD3DP04234 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD3DP04234 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.74■□□□□ 0.59
CD3DP04234 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CD3DP04234 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CD3DP04234 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.74■□□□□ 0.59
CD3DP04234 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD3DP04234 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD3DP04234 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.74■□□□□ 0.59
CD3DP04234 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD3DP04234 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD3DP04234 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CD3DP04234 AC010542.4-201ENST00000563151 1910 ntBASIC18.73■□□□□ 0.59
CD3DP04234 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.73■□□□□ 0.59
CD3DP04234 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD3DP04234 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD3DP04234 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD3DP04234 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.73■□□□□ 0.59
CD3DP04234 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CD3DP04234 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD3DP04234 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CD3DP04234 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CD3DP04234 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.72■□□□□ 0.59
CD3DP04234 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CD3DP04234 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.72■□□□□ 0.59
CD3DP04234 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD3DP04234 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CD3DP04234 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD3DP04234 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.72■□□□□ 0.59
CD3DP04234 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD3DP04234 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.72■□□□□ 0.59
CD3DP04234 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD3DP04234 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD3DP04234 AC005229.4-201ENST00000610085 2198 ntBASIC18.72■□□□□ 0.59
CD3DP04234 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CD3DP04234 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CD3DP04234 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CD3DP04234 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 AC073130.3-201ENST00000624389 2278 ntBASIC18.71■□□□□ 0.59
CD3DP04234 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.71■□□□□ 0.59
CD3DP04234 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.71■□□□□ 0.59
CD3DP04234 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CD3DP04234 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.71■□□□□ 0.59
CD3DP04234 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD3DP04234 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms