Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO2P00403 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO2P00403 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
MT-CO2P00403 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO2P00403 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO2P00403 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO2P00403 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO2P00403 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-CO2P00403 MIR4508-201ENST00000584178 70 ntBASIC17.78■□□□□ 0.44
MT-CO2P00403 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.78■□□□□ 0.44
MT-CO2P00403 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-CO2P00403 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO2P00403 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-CO2P00403 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-CO2P00403 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MT-CO2P00403 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-CO2P00403 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-CO2P00403 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.77■□□□□ 0.44
MT-CO2P00403 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-CO2P00403 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.77■□□□□ 0.43
MT-CO2P00403 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
MT-CO2P00403 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-CO2P00403 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO2P00403 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO2P00403 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MT-CO2P00403 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MT-CO2P00403 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.76■□□□□ 0.43
MT-CO2P00403 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-CO2P00403 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-CO2P00403 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-CO2P00403 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
MT-CO2P00403 AC004448.1-201ENST00000458332 883 ntBASIC17.75■□□□□ 0.43
MT-CO2P00403 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-CO2P00403 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MT-CO2P00403 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MT-CO2P00403 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-CO2P00403 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-CO2P00403 AC138932.1-201ENST00000534164 6830 ntBASIC17.75■□□□□ 0.43
MT-CO2P00403 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
MT-CO2P00403 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
MT-CO2P00403 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 KRT8P33-201ENST00000508125 1423 ntBASIC17.74■□□□□ 0.43
MT-CO2P00403 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
MT-CO2P00403 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 YBX1P4-201ENST00000392794 808 ntBASIC17.74■□□□□ 0.43
MT-CO2P00403 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.74■□□□□ 0.43
MT-CO2P00403 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-CO2P00403 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO2P00403 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO2P00403 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO2P00403 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO2P00403 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-CO2P00403 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.73■□□□□ 0.43
MT-CO2P00403 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO2P00403 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-CO2P00403 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO2P00403 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MT-CO2P00403 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO2P00403 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO2P00403 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO2P00403 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO2P00403 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-CO2P00403 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MT-CO2P00403 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO2P00403 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
MT-CO2P00403 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO2P00403 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO2P00403 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO2P00403 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.72■□□□□ 0.43
MT-CO2P00403 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
MT-CO2P00403 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.72■□□□□ 0.43
MT-CO2P00403 AC103834.1-201ENST00000520383 144 ntBASIC17.72■□□□□ 0.43
MT-CO2P00403 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-CO2P00403 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO2P00403 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms