Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 AC092171.4-201ENST00000609130 632 ntBASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 AC241377.3-202ENST00000626088 1088 ntBASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 AC241585.3-202ENST00000628937 1088 ntBASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 AC245100.8-202ENST00000629247 1058 ntBASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 FP325331.1-202ENST00000623531 1380 ntBASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRBV23-1A0A0A0MS06 AC008406.3-201ENST00000620001 1374 ntBASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 AC144652.1-201ENST00000609974 1624 ntBASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRBV23-1A0A0A0MS06 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV23-1A0A0A0MS06 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 MIR4466-201ENST00000606121 54 ntBASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV23-1A0A0A0MS06 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 AL136116.3-201ENST00000402907 1138 ntBASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV23-1A0A0A0MS06 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
TRBV23-1A0A0A0MS06 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.52■□□□□ 0.55
TRBV23-1A0A0A0MS06 AC092068.2-201ENST00000590491 1708 ntBASIC18.52■□□□□ 0.55
TRBV23-1A0A0A0MS06 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 ANOS2P-203ENST00000472227 1816 ntBASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV23-1A0A0A0MS06 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 AL391422.3-201ENST00000603791 2761 ntBASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV23-1A0A0A0MS06 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms