Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.5■■□□□ 1.03
PCDHGA3Q9Y5H0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA3Q9Y5H0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA3Q9Y5H0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGA3Q9Y5H0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHGA3Q9Y5H0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHGA3Q9Y5H0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGA3Q9Y5H0 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHGA3Q9Y5H0 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.47■■□□□ 1.03
PCDHGA3Q9Y5H0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGA3Q9Y5H0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDHGA3Q9Y5H0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA3Q9Y5H0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGA3Q9Y5H0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 HLA-L-211ENST00000482052 1765 ntBASIC21.46■■□□□ 1.03
PCDHGA3Q9Y5H0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
PCDHGA3Q9Y5H0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 ALDH1A3-203ENST00000557963 1670 ntBASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 pRNA.6-201ENST00000610482 90 ntBASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 pRNA.5-201ENST00000612139 90 ntBASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 pRNA.11-201ENST00000618423 90 ntBASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 pRNA.13-201ENST00000619112 90 ntBASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.45■■□□□ 1.02
PCDHGA3Q9Y5H0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 AC141586.4-201ENST00000624558 1573 ntBASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGA3Q9Y5H0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA3Q9Y5H0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGA3Q9Y5H0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
PCDHGA3Q9Y5H0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms