Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRCC1Q9NPI7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
KRCC1Q9NPI7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRCC1Q9NPI7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KRCC1Q9NPI7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRCC1Q9NPI7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRCC1Q9NPI7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRCC1Q9NPI7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.33■□□□□ 0.84
KRCC1Q9NPI7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 YBX1P4-201ENST00000392794 808 ntBASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
KRCC1Q9NPI7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 AC144652.1-201ENST00000609974 1624 ntBASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 AC012354.3-201ENST00000623734 483 ntBASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KRCC1Q9NPI7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 SNX5-217ENST00000606557 1087 ntBASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRCC1Q9NPI7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRCC1Q9NPI7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 LINC00565-201ENST00000562710 2331 ntBASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRCC1Q9NPI7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms