Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 AC005229.4-201ENST00000610085 2198 ntBASIC17.93■□□□□ 0.46
NKX6-2Q9C056 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 LINC01971-201ENST00000617888 1048 ntBASIC17.93■□□□□ 0.46
NKX6-2Q9C056 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 AL157384.1-201ENST00000445995 2473 ntBASIC17.93■□□□□ 0.46
NKX6-2Q9C056 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-2Q9C056 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L13-201ENST00000554103 1267 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L15-201ENST00000611059 1267 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L23-201ENST00000615195 1269 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L24-201ENST00000617576 1269 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L22-201ENST00000618238 1269 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L20-201ENST00000619712 1269 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L21-201ENST00000622058 1269 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L10-201ENST00000622460 1267 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 DUX4L25-201ENST00000624915 1269 ntBASIC17.92■□□□□ 0.46
NKX6-2Q9C056 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NKX6-2Q9C056 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX6-2Q9C056 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX6-2Q9C056 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NKX6-2Q9C056 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NKX6-2Q9C056 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX6-2Q9C056 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms