Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
YIPF4Q9BSR8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.84■□□□□ 0.93
YIPF4Q9BSR8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
YIPF4Q9BSR8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
YIPF4Q9BSR8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.84■□□□□ 0.93
YIPF4Q9BSR8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
YIPF4Q9BSR8 AC233723.2-201ENST00000623798 2106 ntBASIC20.84■□□□□ 0.93
YIPF4Q9BSR8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
YIPF4Q9BSR8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
YIPF4Q9BSR8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
YIPF4Q9BSR8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
YIPF4Q9BSR8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
YIPF4Q9BSR8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.83■□□□□ 0.93
YIPF4Q9BSR8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
YIPF4Q9BSR8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
YIPF4Q9BSR8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
YIPF4Q9BSR8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 KRT16P3-201ENST00000439127 1283 ntBASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 AC009102.2-201ENST00000606772 1639 ntBASIC20.82■□□□□ 0.92
YIPF4Q9BSR8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
YIPF4Q9BSR8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
YIPF4Q9BSR8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 MIR6724-1-201ENST00000616420 92 ntBASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 MIR6724-2-201ENST00000616483 92 ntBASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 MIR6724-4-201ENST00000617390 92 ntBASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 MIR6724-3-201ENST00000622482 92 ntBASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YIPF4Q9BSR8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 LINC01529-204ENST00000636474 1715 ntBASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YIPF4Q9BSR8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.77■□□□□ 0.92
YIPF4Q9BSR8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YIPF4Q9BSR8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
YIPF4Q9BSR8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.77■□□□□ 0.92
YIPF4Q9BSR8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YIPF4Q9BSR8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YIPF4Q9BSR8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms