Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.87■■□□□ 1.09
SCUBE1Q8IWY4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCUBE1Q8IWY4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCUBE1Q8IWY4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCUBE1Q8IWY4 AF131216.4-201ENST00000638924 1588 ntBASIC21.87■■□□□ 1.09
SCUBE1Q8IWY4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 Z92544.1-202ENST00000571933 1220 ntBASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCUBE1Q8IWY4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCUBE1Q8IWY4 SLC25A24-204ENST00000569674 2357 ntBASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCUBE1Q8IWY4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCUBE1Q8IWY4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCUBE1Q8IWY4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.83■■□□□ 1.09
SCUBE1Q8IWY4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCUBE1Q8IWY4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SCUBE1Q8IWY4 BX664725.1-201ENST00000438252 379 ntBASIC21.83■■□□□ 1.09
SCUBE1Q8IWY4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.83■■□□□ 1.09
SCUBE1Q8IWY4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SCUBE1Q8IWY4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SCUBE1Q8IWY4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SCUBE1Q8IWY4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 AC021242.3-201ENST00000607598 1377 ntBASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.82■■□□□ 1.08
SCUBE1Q8IWY4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCUBE1Q8IWY4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 AC239859.2-201ENST00000444165 318 ntBASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCUBE1Q8IWY4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCUBE1Q8IWY4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms