Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 AC096631.2-201ENST00000436136 790 ntBASIC21.84■■□□□ 1.09
SYVN1Q86TM6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SYVN1Q86TM6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.83■■□□□ 1.09
SYVN1Q86TM6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYVN1Q86TM6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SYVN1Q86TM6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.83■■□□□ 1.09
SYVN1Q86TM6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.83■■□□□ 1.09
SYVN1Q86TM6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SYVN1Q86TM6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.83■■□□□ 1.08
SYVN1Q86TM6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SYVN1Q86TM6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SYVN1Q86TM6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.82■■□□□ 1.08
SYVN1Q86TM6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SYVN1Q86TM6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.8■■□□□ 1.08
SYVN1Q86TM6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 AC133561.4-201ENST00000566112 224 ntBASIC21.79■■□□□ 1.08
SYVN1Q86TM6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.79■■□□□ 1.08
SYVN1Q86TM6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.79■■□□□ 1.08
SYVN1Q86TM6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SYVN1Q86TM6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYVN1Q86TM6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYVN1Q86TM6 EP400NL-214ENST00000641289 2402 ntBASIC21.77■■□□□ 1.08
SYVN1Q86TM6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYVN1Q86TM6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SYVN1Q86TM6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.77■■□□□ 1.08
SYVN1Q86TM6 AC005837.3-201ENST00000612163 286 ntBASIC21.77■■□□□ 1.08
SYVN1Q86TM6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SYVN1Q86TM6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SYVN1Q86TM6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SYVN1Q86TM6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYVN1Q86TM6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SYVN1Q86TM6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYVN1Q86TM6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SYVN1Q86TM6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.76■■□□□ 1.07
SYVN1Q86TM6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SYVN1Q86TM6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SYVN1Q86TM6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SYVN1Q86TM6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SYVN1Q86TM6 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.75■■□□□ 1.07
SYVN1Q86TM6 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.75■■□□□ 1.07
SYVN1Q86TM6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYVN1Q86TM6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.75■■□□□ 1.07
SYVN1Q86TM6 AL353803.4-201ENST00000565882 1934 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms