Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD4Q5XG99 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 AC137761.2-201ENST00000561729 223 ntBASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 AC145350.3-201ENST00000569033 163 ntBASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 LINC01529-204ENST00000636474 1715 ntBASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD4Q5XG99 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 AC006015.1-201ENST00000429970 570 ntBASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD4Q5XG99 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.04■■□□□ 1.12
LYSMD4Q5XG99 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.04■■□□□ 1.12
LYSMD4Q5XG99 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD4Q5XG99 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD4Q5XG99 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.04■■□□□ 1.12
LYSMD4Q5XG99 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.03■■□□□ 1.12
LYSMD4Q5XG99 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 AC144652.1-201ENST00000609974 1624 ntBASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
LYSMD4Q5XG99 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 AC135731.1-201ENST00000569415 2548 ntBASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 KRT18P61-201ENST00000585825 1298 ntBASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 AP003733.4-201ENST00000623785 1697 ntBASIC22.01■■□□□ 1.11
LYSMD4Q5XG99 GAS2L1P2-201ENST00000436355 1356 ntBASIC22■■□□□ 1.11
LYSMD4Q5XG99 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD4Q5XG99 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22■■□□□ 1.11
LYSMD4Q5XG99 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22■■□□□ 1.11
LYSMD4Q5XG99 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD4Q5XG99 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD4Q5XG99 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD4Q5XG99 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22■■□□□ 1.11
LYSMD4Q5XG99 GXYLT1P5-201ENST00000614548 1189 ntBASIC22■■□□□ 1.11
LYSMD4Q5XG99 AC073111.5-205ENST00000641717 521 ntBASIC22■■□□□ 1.11
LYSMD4Q5XG99 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD4Q5XG99 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
LYSMD4Q5XG99 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD4Q5XG99 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 CDCA4P2-201ENST00000441182 718 ntBASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 TPRG1LP1-201ENST00000598702 760 ntBASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 RAP2CP1-201ENST00000605103 478 ntBASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.98■■□□□ 1.11
LYSMD4Q5XG99 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms