Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SOX18P35713 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SOX18P35713 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SOX18P35713 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SOX18P35713 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SOX18P35713 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SOX18P35713 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.83■□□□□ 0.93
SOX18P35713 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOX18P35713 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.83■□□□□ 0.93
SOX18P35713 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOX18P35713 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOX18P35713 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.83■□□□□ 0.93
SOX18P35713 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SOX18P35713 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SOX18P35713 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SOX18P35713 LINC01529-204ENST00000636474 1715 ntBASIC20.83■□□□□ 0.92
SOX18P35713 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.83■□□□□ 0.92
SOX18P35713 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SOX18P35713 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SOX18P35713 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SOX18P35713 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX18P35713 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SOX18P35713 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SOX18P35713 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX18P35713 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.82■□□□□ 0.92
SOX18P35713 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX18P35713 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX18P35713 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SOX18P35713 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
SOX18P35713 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.82■□□□□ 0.92
SOX18P35713 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SOX18P35713 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX18P35713 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SOX18P35713 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SOX18P35713 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX18P35713 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX18P35713 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.81■□□□□ 0.92
SOX18P35713 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX18P35713 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SOX18P35713 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SOX18P35713 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.8■□□□□ 0.92
SOX18P35713 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SOX18P35713 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX18P35713 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.79■□□□□ 0.92
SOX18P35713 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SOX18P35713 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SOX18P35713 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SOX18P35713 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.79■□□□□ 0.92
SOX18P35713 AC006455.2-201ENST00000429931 906 ntBASIC20.79■□□□□ 0.92
SOX18P35713 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SOX18P35713 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX18P35713 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SOX18P35713 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SOX18P35713 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX18P35713 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.78■□□□□ 0.92
SOX18P35713 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX18P35713 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX18P35713 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SOX18P35713 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SOX18P35713 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SOX18P35713 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SOX18P35713 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX18P35713 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX18P35713 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX18P35713 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX18P35713 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.77■□□□□ 0.92
SOX18P35713 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SOX18P35713 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.77■□□□□ 0.92
SOX18P35713 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.77■□□□□ 0.92
SOX18P35713 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SOX18P35713 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.77■□□□□ 0.92
SOX18P35713 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SOX18P35713 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX18P35713 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX18P35713 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SOX18P35713 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SOX18P35713 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.77■□□□□ 0.91
SOX18P35713 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SOX18P35713 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SOX18P35713 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX18P35713 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SOX18P35713 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SOX18P35713 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.76■□□□□ 0.91
SOX18P35713 AC099791.2-201ENST00000605725 427 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms