Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.61■■□□□ 1.53
COL1A2P08123 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.61■■□□□ 1.53
COL1A2P08123 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
COL1A2P08123 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
COL1A2P08123 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL1A2P08123 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL1A2P08123 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.6■■□□□ 1.53
COL1A2P08123 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.6■■□□□ 1.53
COL1A2P08123 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL1A2P08123 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.6■■□□□ 1.53
COL1A2P08123 AC087623.3-201ENST00000607047 1098 ntBASIC24.6■■□□□ 1.53
COL1A2P08123 AL358852.1-201ENST00000623174 1268 ntBASIC24.6■■□□□ 1.53
COL1A2P08123 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL1A2P08123 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL1A2P08123 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL1A2P08123 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL1A2P08123 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
COL1A2P08123 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.59■■□□□ 1.53
COL1A2P08123 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.59■■□□□ 1.53
COL1A2P08123 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
COL1A2P08123 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.59■■□□□ 1.53
COL1A2P08123 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
COL1A2P08123 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.58■■□□□ 1.53
COL1A2P08123 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL1A2P08123 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.58■■□□□ 1.53
COL1A2P08123 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
COL1A2P08123 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.58■■□□□ 1.52
COL1A2P08123 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
COL1A2P08123 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
COL1A2P08123 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A2P08123 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.57■■□□□ 1.52
COL1A2P08123 AC012414.1-201ENST00000556676 535 ntBASIC24.57■■□□□ 1.52
COL1A2P08123 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.57■■□□□ 1.52
COL1A2P08123 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.57■■□□□ 1.52
COL1A2P08123 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.57■■□□□ 1.52
COL1A2P08123 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
COL1A2P08123 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.57■■□□□ 1.52
COL1A2P08123 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.57■■□□□ 1.52
COL1A2P08123 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
COL1A2P08123 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL1A2P08123 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL1A2P08123 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL1A2P08123 AC027612.3-201ENST00000413684 1047 ntBASIC24.56■■□□□ 1.52
COL1A2P08123 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.56■■□□□ 1.52
COL1A2P08123 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.56■■□□□ 1.52
COL1A2P08123 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL1A2P08123 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.56■■□□□ 1.52
COL1A2P08123 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL1A2P08123 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.56■■□□□ 1.52
COL1A2P08123 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL1A2P08123 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.56■■□□□ 1.52
COL1A2P08123 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
COL1A2P08123 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.55■■□□□ 1.52
COL1A2P08123 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A2P08123 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A2P08123 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.55■■□□□ 1.52
COL1A2P08123 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A2P08123 YBX1P1-201ENST00000445822 960 ntBASIC24.55■■□□□ 1.52
COL1A2P08123 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.55■■□□□ 1.52
COL1A2P08123 AL354811.1-201ENST00000610286 706 ntBASIC24.55■■□□□ 1.52
COL1A2P08123 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.55■■□□□ 1.52
COL1A2P08123 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A2P08123 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A2P08123 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL1A2P08123 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 AC104564.3-201ENST00000582367 638 ntBASIC24.54■■□□□ 1.52
COL1A2P08123 AL353803.4-201ENST00000565882 1934 ntBASIC24.54■■□□□ 1.52
COL1A2P08123 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
COL1A2P08123 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.54■■□□□ 1.52
COL1A2P08123 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL1A2P08123 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL1A2P08123 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
COL1A2P08123 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL1A2P08123 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL1A2P08123 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL1A2P08123 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.53■■□□□ 1.52
COL1A2P08123 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.53■■□□□ 1.52
COL1A2P08123 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL1A2P08123 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.53■■□□□ 1.52
COL1A2P08123 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.53■■□□□ 1.52
COL1A2P08123 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
COL1A2P08123 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.52■■□□□ 1.52
COL1A2P08123 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A2P08123 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A2P08123 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL1A2P08123 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.52■■□□□ 1.52
COL1A2P08123 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
COL1A2P08123 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.51■■□□□ 1.51
COL1A2P08123 AC004687.1-201ENST00000579003 1625 ntBASIC24.51■■□□□ 1.51
COL1A2P08123 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A2P08123 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL1A2P08123 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
COL1A2P08123 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms