Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SFTPBP07988 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTPBP07988 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.19■□□□□ 0.66
SFTPBP07988 AC021242.3-201ENST00000607598 1377 ntBASIC19.19■□□□□ 0.66
SFTPBP07988 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.19■□□□□ 0.66
SFTPBP07988 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SFTPBP07988 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.19■□□□□ 0.66
SFTPBP07988 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTPBP07988 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SFTPBP07988 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SFTPBP07988 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.19■□□□□ 0.66
SFTPBP07988 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTPBP07988 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SFTPBP07988 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SFTPBP07988 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SFTPBP07988 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SFTPBP07988 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTPBP07988 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTPBP07988 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTPBP07988 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.18■□□□□ 0.66
SFTPBP07988 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTPBP07988 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.18■□□□□ 0.66
SFTPBP07988 TSPY9P-201ENST00000440215 945 ntBASIC19.18■□□□□ 0.66
SFTPBP07988 TSPY11P-201ENST00000442607 1045 ntBASIC19.18■□□□□ 0.66
SFTPBP07988 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.18■□□□□ 0.66
SFTPBP07988 AC131212.1-201ENST00000613771 668 ntBASIC19.18■□□□□ 0.66
SFTPBP07988 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SFTPBP07988 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTPBP07988 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SFTPBP07988 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SFTPBP07988 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SFTPBP07988 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SFTPBP07988 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SFTPBP07988 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SFTPBP07988 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.17■□□□□ 0.66
SFTPBP07988 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SFTPBP07988 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.16■□□□□ 0.66
SFTPBP07988 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SFTPBP07988 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.16■□□□□ 0.66
SFTPBP07988 UNC93B8-201ENST00000511903 705 ntBASIC19.16■□□□□ 0.66
SFTPBP07988 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.16■□□□□ 0.66
SFTPBP07988 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SFTPBP07988 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
SFTPBP07988 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.16■□□□□ 0.66
SFTPBP07988 C1orf229-201ENST00000623686 2258 ntBASIC19.16■□□□□ 0.66
SFTPBP07988 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SFTPBP07988 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SFTPBP07988 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.15■□□□□ 0.66
SFTPBP07988 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
SFTPBP07988 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SFTPBP07988 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.15■□□□□ 0.66
SFTPBP07988 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.15■□□□□ 0.66
SFTPBP07988 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SFTPBP07988 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SFTPBP07988 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SFTPBP07988 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.14■□□□□ 0.66
SFTPBP07988 AC233723.2-201ENST00000623798 2106 ntBASIC19.14■□□□□ 0.65
SFTPBP07988 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SFTPBP07988 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SFTPBP07988 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.14■□□□□ 0.65
SFTPBP07988 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SFTPBP07988 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SFTPBP07988 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SFTPBP07988 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
SFTPBP07988 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SFTPBP07988 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.13■□□□□ 0.65
SFTPBP07988 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SFTPBP07988 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.13■□□□□ 0.65
SFTPBP07988 AC092028.1-203ENST00000608262 953 ntBASIC19.13■□□□□ 0.65
SFTPBP07988 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SFTPBP07988 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SFTPBP07988 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.13■□□□□ 0.65
SFTPBP07988 AC079630.1-202ENST00000618127 1840 ntBASIC19.13■□□□□ 0.65
SFTPBP07988 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.13■□□□□ 0.65
SFTPBP07988 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SFTPBP07988 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms