Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX39AO00148 SLC47A1P1-202ENST00000449666 945 ntBASIC25.07■■□□□ 1.6
DDX39AO00148 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
DDX39AO00148 CA15P2-201ENST00000611168 834 ntBASIC25.07■■□□□ 1.6
DDX39AO00148 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.07■■□□□ 1.6
DDX39AO00148 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.07■■□□□ 1.6
DDX39AO00148 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.07■■□□□ 1.6
DDX39AO00148 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX39AO00148 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX39AO00148 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.06■■□□□ 1.6
DDX39AO00148 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX39AO00148 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX39AO00148 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX39AO00148 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DDX39AO00148 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
DDX39AO00148 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
DDX39AO00148 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.05■■□□□ 1.6
DDX39AO00148 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX39AO00148 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX39AO00148 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX39AO00148 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
DDX39AO00148 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DDX39AO00148 ANOS2P-203ENST00000472227 1816 ntBASIC25.05■■□□□ 1.6
DDX39AO00148 RASA4CP-201ENST00000424092 1398 ntBASIC25.05■■□□□ 1.6
DDX39AO00148 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX39AO00148 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX39AO00148 BX842568.3-201ENST00000418104 571 ntBASIC25.04■■□□□ 1.6
DDX39AO00148 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.04■■□□□ 1.6
DDX39AO00148 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.04■■□□□ 1.6
DDX39AO00148 AC010525.1-201ENST00000585559 441 ntBASIC25.04■■□□□ 1.6
DDX39AO00148 AC233992.3-201ENST00000607491 485 ntBASIC25.04■■□□□ 1.6
DDX39AO00148 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DDX39AO00148 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DDX39AO00148 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX39AO00148 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DDX39AO00148 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DDX39AO00148 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX39AO00148 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
DDX39AO00148 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.03■■□□□ 1.6
DDX39AO00148 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.03■■□□□ 1.6
DDX39AO00148 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DDX39AO00148 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.02■■□□□ 1.6
DDX39AO00148 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.02■■□□□ 1.6
DDX39AO00148 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.02■■□□□ 1.6
DDX39AO00148 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DDX39AO00148 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.02■■□□□ 1.6
DDX39AO00148 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.02■■□□□ 1.6
DDX39AO00148 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
DDX39AO00148 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
DDX39AO00148 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX39AO00148 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DDX39AO00148 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DDX39AO00148 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.01■■□□□ 1.59
DDX39AO00148 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DDX39AO00148 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25■■□□□ 1.59
DDX39AO00148 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
DDX39AO00148 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX39AO00148 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX39AO00148 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX39AO00148 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX39AO00148 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25■■□□□ 1.59
DDX39AO00148 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25■■□□□ 1.59
DDX39AO00148 AC126544.1-201ENST00000580842 1059 ntBASIC25■■□□□ 1.59
DDX39AO00148 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25■■□□□ 1.59
DDX39AO00148 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX39AO00148 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DDX39AO00148 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25■■□□□ 1.59
DDX39AO00148 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
DDX39AO00148 AC004687.1-201ENST00000579003 1625 ntBASIC25■■□□□ 1.59
DDX39AO00148 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.99■■□□□ 1.59
DDX39AO00148 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX39AO00148 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX39AO00148 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX39AO00148 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX39AO00148 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX39AO00148 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DDX39AO00148 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
DDX39AO00148 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.99■■□□□ 1.59
DDX39AO00148 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.99■■□□□ 1.59
DDX39AO00148 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
DDX39AO00148 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.98■■□□□ 1.59
DDX39AO00148 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
DDX39AO00148 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX39AO00148 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
DDX39AO00148 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
DDX39AO00148 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.98■■□□□ 1.59
DDX39AO00148 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
DDX39AO00148 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
DDX39AO00148 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.97■■□□□ 1.59
DDX39AO00148 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
DDX39AO00148 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.97■■□□□ 1.59
DDX39AO00148 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
DDX39AO00148 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms