Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SPDYE3A6NKU9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SPDYE3A6NKU9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.38■■□□□ 1.65
SPDYE3A6NKU9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.38■■□□□ 1.65
SPDYE3A6NKU9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SPDYE3A6NKU9 AC027682.1-201ENST00000562846 899 ntBASIC25.38■■□□□ 1.65
SPDYE3A6NKU9 AC008764.7-201ENST00000593779 1081 ntBASIC25.38■■□□□ 1.65
SPDYE3A6NKU9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 AC091305.1-201ENST00000479476 895 ntBASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 AC092068.2-201ENST00000590491 1708 ntBASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SPDYE3A6NKU9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 BX842568.3-201ENST00000418104 571 ntBASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
SPDYE3A6NKU9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 AC233992.3-201ENST00000607491 485 ntBASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SPDYE3A6NKU9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 RASA4CP-201ENST00000424092 1398 ntBASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPDYE3A6NKU9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 AC099791.1-201ENST00000416440 715 ntBASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SPDYE3A6NKU9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 SLC47A1P1-202ENST00000449666 945 ntBASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SPDYE3A6NKU9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 CA15P2-201ENST00000611168 834 ntBASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SPDYE3A6NKU9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPDYE3A6NKU9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPDYE3A6NKU9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPDYE3A6NKU9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
SPDYE3A6NKU9 OR2I1P-207ENST00000453522 948 ntBASIC25.3■■□□□ 1.64
SPDYE3A6NKU9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.3■■□□□ 1.64
SPDYE3A6NKU9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.3■■□□□ 1.64
SPDYE3A6NKU9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPDYE3A6NKU9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SPDYE3A6NKU9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SPDYE3A6NKU9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPDYE3A6NKU9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 1031.7 ms