Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX4Q9NQI0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX4Q9NQI0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX4Q9NQI0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX4Q9NQI0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX4Q9NQI0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 LINC00543-201ENST00000567234 1845 ntBASIC26.6■■□□□ 1.85
DDX4Q9NQI0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 OR2I1P-207ENST00000453522 948 ntBASIC26.6■■□□□ 1.85
DDX4Q9NQI0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.6■■□□□ 1.85
DDX4Q9NQI0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 LINC01529-204ENST00000636474 1715 ntBASIC26.59■■□□□ 1.85
DDX4Q9NQI0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX4Q9NQI0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX4Q9NQI0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX4Q9NQI0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.58■■□□□ 1.85
DDX4Q9NQI0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.58■■□□□ 1.85
DDX4Q9NQI0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX4Q9NQI0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX4Q9NQI0 MIR6084-201ENST00000622012 110 ntBASIC26.58■■□□□ 1.85
DDX4Q9NQI0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
DDX4Q9NQI0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
DDX4Q9NQI0 AL139125.2-201ENST00000623134 1869 ntBASIC26.57■■□□□ 1.84
DDX4Q9NQI0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
DDX4Q9NQI0 MIR572-201ENST00000384983 95 ntBASIC26.57■■□□□ 1.84
DDX4Q9NQI0 YBX1P1-201ENST00000445822 960 ntBASIC26.57■■□□□ 1.84
DDX4Q9NQI0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
DDX4Q9NQI0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
DDX4Q9NQI0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX4Q9NQI0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
DDX4Q9NQI0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.54■■□□□ 1.84
DDX4Q9NQI0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX4Q9NQI0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX4Q9NQI0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
DDX4Q9NQI0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
DDX4Q9NQI0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX4Q9NQI0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX4Q9NQI0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 AC027612.3-201ENST00000413684 1047 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 AC012414.1-201ENST00000556676 535 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4L2-201ENST00000561772 1275 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4L6-201ENST00000626483 1275 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4L1-201ENST00000627662 1275 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4L8-201ENST00000629013 1275 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4L3-201ENST00000630187 1275 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4L7-201ENST00000630678 1275 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 DUX4L5-201ENST00000630834 1275 ntBASIC26.53■■□□□ 1.84
DDX4Q9NQI0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX4Q9NQI0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 AC034268.1-201ENST00000441047 882 ntBASIC26.52■■□□□ 1.84
DDX4Q9NQI0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms