Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 MIR4466-201ENST00000606121 54 ntBASIC19.44■□□□□ 0.7
CDH20Q9HBT6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDH20Q9HBT6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 AC144652.1-201ENST00000609974 1624 ntBASIC19.43■□□□□ 0.7
CDH20Q9HBT6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 AC241377.3-202ENST00000626088 1088 ntBASIC19.43■□□□□ 0.7
CDH20Q9HBT6 AC241585.3-202ENST00000628937 1088 ntBASIC19.43■□□□□ 0.7
CDH20Q9HBT6 AC245100.8-202ENST00000629247 1058 ntBASIC19.43■□□□□ 0.7
CDH20Q9HBT6 ANOS2P-203ENST00000472227 1816 ntBASIC19.43■□□□□ 0.7
CDH20Q9HBT6 AC079630.1-202ENST00000618127 1840 ntBASIC19.43■□□□□ 0.7
CDH20Q9HBT6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH20Q9HBT6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 AC092171.4-201ENST00000609130 632 ntBASIC19.42■□□□□ 0.7
CDH20Q9HBT6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH20Q9HBT6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 FP325331.1-202ENST00000623531 1380 ntBASIC19.41■□□□□ 0.7
CDH20Q9HBT6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH20Q9HBT6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.4■□□□□ 0.7
CDH20Q9HBT6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH20Q9HBT6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH20Q9HBT6 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH20Q9HBT6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 AC009086.3-201ENST00000623486 1008 ntBASIC19.39■□□□□ 0.69
CDH20Q9HBT6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 LINC01529-204ENST00000636474 1715 ntBASIC19.39■□□□□ 0.69
CDH20Q9HBT6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDH20Q9HBT6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 AC099791.2-201ENST00000605725 427 ntBASIC19.38■□□□□ 0.69
CDH20Q9HBT6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH20Q9HBT6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH20Q9HBT6 AC092068.2-201ENST00000590491 1708 ntBASIC19.37■□□□□ 0.69
CDH20Q9HBT6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH20Q9HBT6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms