Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.78■■□□□ 1.4
TWNKQ96RR1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
TWNKQ96RR1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TWNKQ96RR1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TWNKQ96RR1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TWNKQ96RR1 DUSP8P3-201ENST00000399571 1760 ntBASIC23.78■■□□□ 1.4
TWNKQ96RR1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.77■■□□□ 1.4
TWNKQ96RR1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TWNKQ96RR1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.77■■□□□ 1.4
TWNKQ96RR1 SERBP1P1-201ENST00000396021 1160 ntBASIC23.77■■□□□ 1.4
TWNKQ96RR1 AC096631.2-201ENST00000436136 790 ntBASIC23.77■■□□□ 1.4
TWNKQ96RR1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.77■■□□□ 1.4
TWNKQ96RR1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.77■■□□□ 1.4
TWNKQ96RR1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.77■■□□□ 1.4
TWNKQ96RR1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TWNKQ96RR1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TWNKQ96RR1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.76■■□□□ 1.39
TWNKQ96RR1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TWNKQ96RR1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.76■■□□□ 1.39
TWNKQ96RR1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.76■■□□□ 1.39
TWNKQ96RR1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.76■■□□□ 1.39
TWNKQ96RR1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TWNKQ96RR1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.75■■□□□ 1.39
TWNKQ96RR1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.75■■□□□ 1.39
TWNKQ96RR1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TWNKQ96RR1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TWNKQ96RR1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TWNKQ96RR1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.75■■□□□ 1.39
TWNKQ96RR1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TWNKQ96RR1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TWNKQ96RR1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TWNKQ96RR1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TWNKQ96RR1 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.75■■□□□ 1.39
TWNKQ96RR1 pRNA.6-201ENST00000610482 90 ntBASIC23.75■■□□□ 1.39
TWNKQ96RR1 pRNA.5-201ENST00000612139 90 ntBASIC23.75■■□□□ 1.39
TWNKQ96RR1 AC110285.6-201ENST00000617652 491 ntBASIC23.75■■□□□ 1.39
TWNKQ96RR1 pRNA.11-201ENST00000618423 90 ntBASIC23.75■■□□□ 1.39
TWNKQ96RR1 pRNA.13-201ENST00000619112 90 ntBASIC23.75■■□□□ 1.39
TWNKQ96RR1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.75■■□□□ 1.39
TWNKQ96RR1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TWNKQ96RR1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.74■■□□□ 1.39
TWNKQ96RR1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.74■■□□□ 1.39
TWNKQ96RR1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 UNC93B3-201ENST00000308076 687 ntBASIC23.74■■□□□ 1.39
TWNKQ96RR1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.74■■□□□ 1.39
TWNKQ96RR1 MIR3181-201ENST00000578512 73 ntBASIC23.74■■□□□ 1.39
TWNKQ96RR1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TWNKQ96RR1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 DUSP8P5-201ENST00000422884 1815 ntBASIC23.74■■□□□ 1.39
TWNKQ96RR1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.74■■□□□ 1.39
TWNKQ96RR1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
TWNKQ96RR1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TWNKQ96RR1 SYT6-210ENST00000641643 1587 ntBASIC23.74■■□□□ 1.39
TWNKQ96RR1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TWNKQ96RR1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.73■■□□□ 1.39
TWNKQ96RR1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.73■■□□□ 1.39
TWNKQ96RR1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.73■■□□□ 1.39
TWNKQ96RR1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.73■■□□□ 1.39
TWNKQ96RR1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TWNKQ96RR1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TWNKQ96RR1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TWNKQ96RR1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TWNKQ96RR1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TWNKQ96RR1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TWNKQ96RR1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TWNKQ96RR1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TWNKQ96RR1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TWNKQ96RR1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TWNKQ96RR1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.71■■□□□ 1.39
TWNKQ96RR1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.71■■□□□ 1.39
TWNKQ96RR1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TWNKQ96RR1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TWNKQ96RR1 AL499627.2-201ENST00000606283 725 ntBASIC23.71■■□□□ 1.39
TWNKQ96RR1 AC092171.4-201ENST00000609130 632 ntBASIC23.71■■□□□ 1.39
TWNKQ96RR1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
TWNKQ96RR1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TWNKQ96RR1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
TWNKQ96RR1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.7■■□□□ 1.38
TWNKQ96RR1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.7■■□□□ 1.38
TWNKQ96RR1 C9orf163-202ENST00000624034 2573 ntBASIC23.7■■□□□ 1.38
TWNKQ96RR1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
TWNKQ96RR1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TWNKQ96RR1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.69■■□□□ 1.38
TWNKQ96RR1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TWNKQ96RR1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.69■■□□□ 1.38
TWNKQ96RR1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms